Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03161 and H281DRAFT_03162 are separated by 106 nucleotides H281DRAFT_03162 and H281DRAFT_03163 are separated by 176 nucleotides
H281DRAFT_03161: H281DRAFT_03161 - MFS transporter, MHS family, proline/betaine transporter, at 200,428 to 201,714
_03161
H281DRAFT_03162: H281DRAFT_03162 - transcriptional regulator, XRE family with cupin sensor, at 201,821 to 202,468
_03162
H281DRAFT_03163: H281DRAFT_03163 - Protein of unknown function (DUF3348), at 202,645 to 203,550
_03163
Position (kb) 201
202
203 Strain fitness (log2 ratio) -1
0
1
2 at 200.949 kb on + strand, within H281DRAFT_03161 at 200.949 kb on + strand, within H281DRAFT_03161 at 200.951 kb on + strand, within H281DRAFT_03161 at 200.952 kb on - strand, within H281DRAFT_03161 at 200.952 kb on - strand, within H281DRAFT_03161 at 201.281 kb on + strand, within H281DRAFT_03161 at 201.430 kb on + strand, within H281DRAFT_03161 at 201.532 kb on + strand, within H281DRAFT_03161 at 201.615 kb on - strand at 201.630 kb on - strand at 201.708 kb on + strand at 201.709 kb on - strand at 201.709 kb on - strand at 201.717 kb on + strand at 201.717 kb on + strand at 201.717 kb on + strand at 201.753 kb on + strand at 201.754 kb on - strand at 202.017 kb on - strand, within H281DRAFT_03162 at 202.142 kb on + strand, within H281DRAFT_03162 at 202.158 kb on - strand, within H281DRAFT_03162 at 202.254 kb on - strand, within H281DRAFT_03162 at 202.358 kb on + strand, within H281DRAFT_03162 at 202.358 kb on + strand, within H281DRAFT_03162 at 202.367 kb on - strand, within H281DRAFT_03162 at 202.385 kb on + strand, within H281DRAFT_03162 at 202.385 kb on + strand, within H281DRAFT_03162 at 202.542 kb on + strand at 202.542 kb on + strand at 202.543 kb on - strand at 202.616 kb on - strand at 202.644 kb on + strand at 202.644 kb on + strand at 202.982 kb on - strand, within H281DRAFT_03163 at 203.003 kb on - strand, within H281DRAFT_03163
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 200,949 + H281DRAFT_03161 0.40 -0.6 200,949 + H281DRAFT_03161 0.40 +2.5 200,951 + H281DRAFT_03161 0.41 -0.2 200,952 - H281DRAFT_03161 0.41 +1.4 200,952 - H281DRAFT_03161 0.41 +1.6 201,281 + H281DRAFT_03161 0.66 +0.2 201,430 + H281DRAFT_03161 0.78 +0.1 201,532 + H281DRAFT_03161 0.86 +0.3 201,615 - +1.9 201,630 - +1.7 201,708 + -0.2 201,709 - +0.9 201,709 - +1.1 201,717 + +0.6 201,717 + +0.3 201,717 + -0.1 201,753 + +0.6 201,754 - +1.7 202,017 - H281DRAFT_03162 0.30 +2.3 202,142 + H281DRAFT_03162 0.50 +1.6 202,158 - H281DRAFT_03162 0.52 +1.5 202,254 - H281DRAFT_03162 0.67 +1.6 202,358 + H281DRAFT_03162 0.83 +0.1 202,358 + H281DRAFT_03162 0.83 +0.8 202,367 - H281DRAFT_03162 0.84 +0.9 202,385 + H281DRAFT_03162 0.87 +0.7 202,385 + H281DRAFT_03162 0.87 +0.1 202,542 + -0.3 202,542 + +0.9 202,543 - +1.1 202,616 - +0.6 202,644 + +0.4 202,644 + +0.4 202,982 - H281DRAFT_03163 0.37 +0.4 203,003 - H281DRAFT_03163 0.40 +0.2
Or see this region's nucleotide sequence