Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03036 and H281DRAFT_03037 are separated by 23 nucleotides H281DRAFT_03037 and H281DRAFT_03038 are separated by 48 nucleotides H281DRAFT_03038 and H281DRAFT_03039 overlap by 4 nucleotides
H281DRAFT_03036: H281DRAFT_03036 - hypothetical protein, at 67,096 to 67,338
_03036
H281DRAFT_03037: H281DRAFT_03037 - Exodeoxyribonuclease III (EC 3.1.11.2), at 67,362 to 68,171
_03037
H281DRAFT_03038: H281DRAFT_03038 - chemotaxis protein MotB, at 68,220 to 69,206
_03038
H281DRAFT_03039: H281DRAFT_03039 - chemotaxis protein MotA, at 69,203 to 70,090
_03039
Position (kb) 68
69
70 Strain fitness (log2 ratio) -1
0
1 at 67.686 kb on + strand, within H281DRAFT_03037 at 67.728 kb on + strand, within H281DRAFT_03037 at 67.729 kb on - strand, within H281DRAFT_03037 at 67.842 kb on + strand, within H281DRAFT_03037 at 67.842 kb on + strand, within H281DRAFT_03037 at 67.842 kb on + strand, within H281DRAFT_03037 at 67.843 kb on - strand, within H281DRAFT_03037 at 67.966 kb on - strand, within H281DRAFT_03037 at 67.967 kb on + strand, within H281DRAFT_03037 at 67.967 kb on + strand, within H281DRAFT_03037 at 67.967 kb on + strand, within H281DRAFT_03037 at 67.980 kb on + strand, within H281DRAFT_03037 at 68.028 kb on - strand, within H281DRAFT_03037 at 68.229 kb on + strand at 68.418 kb on + strand, within H281DRAFT_03038 at 68.419 kb on - strand, within H281DRAFT_03038 at 68.419 kb on - strand, within H281DRAFT_03038 at 68.548 kb on + strand, within H281DRAFT_03038 at 68.548 kb on + strand at 68.638 kb on + strand, within H281DRAFT_03038 at 68.639 kb on - strand, within H281DRAFT_03038 at 68.996 kb on - strand, within H281DRAFT_03038 at 69.088 kb on + strand, within H281DRAFT_03038 at 69.089 kb on - strand, within H281DRAFT_03038 at 69.337 kb on - strand, within H281DRAFT_03039 at 69.663 kb on - strand, within H281DRAFT_03039 at 69.706 kb on - strand, within H281DRAFT_03039 at 69.844 kb on - strand, within H281DRAFT_03039 at 69.986 kb on + strand, within H281DRAFT_03039 at 69.987 kb on - strand, within H281DRAFT_03039 at 70.177 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 67,686 + H281DRAFT_03037 0.40 -0.1 67,728 + H281DRAFT_03037 0.45 -0.1 67,729 - H281DRAFT_03037 0.45 +0.0 67,842 + H281DRAFT_03037 0.59 +0.9 67,842 + H281DRAFT_03037 0.59 -0.5 67,842 + H281DRAFT_03037 0.59 +0.4 67,843 - H281DRAFT_03037 0.59 +0.2 67,966 - H281DRAFT_03037 0.75 -0.2 67,967 + H281DRAFT_03037 0.75 +0.3 67,967 + H281DRAFT_03037 0.75 +0.4 67,967 + H281DRAFT_03037 0.75 +0.5 67,980 + H281DRAFT_03037 0.76 -1.0 68,028 - H281DRAFT_03037 0.82 +0.2 68,229 + -0.9 68,418 + H281DRAFT_03038 0.20 -0.8 68,419 - H281DRAFT_03038 0.20 -1.3 68,419 - H281DRAFT_03038 0.20 -0.3 68,548 + H281DRAFT_03038 0.33 -0.1 68,548 + -0.6 68,638 + H281DRAFT_03038 0.42 +0.5 68,639 - H281DRAFT_03038 0.42 -0.4 68,996 - H281DRAFT_03038 0.79 +0.7 69,088 + H281DRAFT_03038 0.88 -1.0 69,089 - H281DRAFT_03038 0.88 +0.2 69,337 - H281DRAFT_03039 0.15 -0.1 69,663 - H281DRAFT_03039 0.52 +0.0 69,706 - H281DRAFT_03039 0.57 -0.4 69,844 - H281DRAFT_03039 0.72 -0.6 69,986 + H281DRAFT_03039 0.88 +0.1 69,987 - H281DRAFT_03039 0.88 -0.5 70,177 + +0.9
Or see this region's nucleotide sequence