Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02044 and H281DRAFT_02045 are separated by 317 nucleotides H281DRAFT_02045 and H281DRAFT_02046 are separated by 29 nucleotides
H281DRAFT_02044: H281DRAFT_02044 - glycerophosphoryl diester phosphodiesterase, at 167,796 to 168,560
_02044
H281DRAFT_02045: H281DRAFT_02045 - transcriptional regulator, DeoR family, at 168,878 to 169,648
_02045
H281DRAFT_02046: H281DRAFT_02046 - phosphate:Na+ symporter, at 169,678 to 171,345
_02046
Position (kb) 168
169
170 Strain fitness (log2 ratio) -1
0
1 at 168.281 kb on - strand, within H281DRAFT_02044 at 168.320 kb on + strand, within H281DRAFT_02044 at 168.320 kb on + strand, within H281DRAFT_02044 at 168.321 kb on - strand, within H281DRAFT_02044 at 168.321 kb on - strand, within H281DRAFT_02044 at 168.321 kb on - strand, within H281DRAFT_02044 at 168.537 kb on + strand at 168.537 kb on + strand at 168.537 kb on + strand at 168.538 kb on - strand at 168.538 kb on - strand at 168.645 kb on - strand at 168.735 kb on + strand at 168.784 kb on + strand at 168.785 kb on - strand at 168.836 kb on + strand at 168.836 kb on + strand at 168.906 kb on + strand at 168.906 kb on + strand at 169.224 kb on + strand, within H281DRAFT_02045 at 169.224 kb on + strand, within H281DRAFT_02045 at 169.508 kb on + strand, within H281DRAFT_02045 at 169.542 kb on - strand, within H281DRAFT_02045 at 169.542 kb on - strand, within H281DRAFT_02045 at 169.760 kb on + strand at 169.877 kb on + strand, within H281DRAFT_02046 at 169.877 kb on + strand, within H281DRAFT_02046 at 169.878 kb on - strand, within H281DRAFT_02046 at 169.878 kb on - strand, within H281DRAFT_02046 at 169.924 kb on + strand, within H281DRAFT_02046 at 169.925 kb on - strand, within H281DRAFT_02046 at 169.925 kb on - strand, within H281DRAFT_02046 at 169.925 kb on - strand, within H281DRAFT_02046 at 170.070 kb on + strand, within H281DRAFT_02046
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 168,281 - H281DRAFT_02044 0.63 +0.3 168,320 + H281DRAFT_02044 0.68 -0.7 168,320 + H281DRAFT_02044 0.68 -0.4 168,321 - H281DRAFT_02044 0.69 -1.1 168,321 - H281DRAFT_02044 0.69 +0.4 168,321 - H281DRAFT_02044 0.69 -0.3 168,537 + +0.1 168,537 + +0.8 168,537 + -0.5 168,538 - +0.2 168,538 - +0.1 168,645 - -0.5 168,735 + -0.3 168,784 + -1.1 168,785 - -0.4 168,836 + +0.5 168,836 + -0.2 168,906 + -0.5 168,906 + -0.5 169,224 + H281DRAFT_02045 0.45 -0.1 169,224 + H281DRAFT_02045 0.45 -0.9 169,508 + H281DRAFT_02045 0.82 +0.0 169,542 - H281DRAFT_02045 0.86 -0.7 169,542 - H281DRAFT_02045 0.86 +0.1 169,760 + -0.3 169,877 + H281DRAFT_02046 0.12 -0.0 169,877 + H281DRAFT_02046 0.12 -1.0 169,878 - H281DRAFT_02046 0.12 +0.3 169,878 - H281DRAFT_02046 0.12 -0.8 169,924 + H281DRAFT_02046 0.15 -0.9 169,925 - H281DRAFT_02046 0.15 -0.3 169,925 - H281DRAFT_02046 0.15 -1.1 169,925 - H281DRAFT_02046 0.15 -0.4 170,070 + H281DRAFT_02046 0.24 -0.2
Or see this region's nucleotide sequence