Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01824 and H281DRAFT_01825 are separated by 87 nucleotides H281DRAFT_01825 and H281DRAFT_01826 are separated by 884 nucleotides
H281DRAFT_01824: H281DRAFT_01824 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 729,080 to 730,639
_01824
H281DRAFT_01825: H281DRAFT_01825 - Outer membrane protein (porin), at 730,727 to 731,869
_01825
H281DRAFT_01826: H281DRAFT_01826 - hypothetical protein, at 732,754 to 732,903
_01826
Position (kb)
730
731
732 Strain fitness (log2 ratio)
-1
0
1
2 at 729.797 kb on - strand, within H281DRAFT_01824 at 730.201 kb on + strand, within H281DRAFT_01824 at 730.202 kb on - strand, within H281DRAFT_01824 at 730.394 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand at 730.411 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand, within H281DRAFT_01824 at 730.729 kb on - strand at 730.729 kb on - strand at 731.039 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.464 kb on - strand, within H281DRAFT_01825 at 731.630 kb on - strand, within H281DRAFT_01825 at 731.855 kb on - strand at 731.855 kb on - strand at 731.855 kb on - strand at 732.086 kb on - strand at 732.250 kb on + strand at 732.250 kb on + strand at 732.251 kb on - strand at 732.251 kb on - strand at 732.251 kb on - strand at 732.261 kb on + strand at 732.284 kb on + strand at 732.285 kb on - strand at 732.323 kb on + strand at 732.358 kb on - strand at 732.408 kb on + strand at 732.408 kb on + strand at 732.409 kb on - strand at 732.409 kb on - strand at 732.529 kb on + strand at 732.530 kb on - strand at 732.533 kb on + strand at 732.533 kb on + strand at 732.533 kb on + strand at 732.534 kb on - strand at 732.534 kb on - strand at 732.537 kb on + strand at 732.537 kb on + strand at 732.538 kb on - strand at 732.547 kb on + strand at 732.548 kb on - strand at 732.548 kb on - strand at 732.550 kb on + strand at 732.550 kb on + strand at 732.551 kb on - strand at 732.551 kb on - strand at 732.660 kb on + strand at 732.661 kb on - strand at 732.666 kb on - strand at 732.666 kb on - strand at 732.689 kb on + strand at 732.695 kb on + strand at 732.695 kb on + strand at 732.695 kb on + strand at 732.695 kb on + strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.696 kb on - strand at 732.755 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 729,797 - H281DRAFT_01824 0.46 +0.3 730,201 + H281DRAFT_01824 0.72 -0.1 730,202 - H281DRAFT_01824 0.72 -0.3 730,394 - H281DRAFT_01824 0.84 -1.0 730,411 - +0.4 730,411 - H281DRAFT_01824 0.85 +1.8 730,411 - H281DRAFT_01824 0.85 +1.1 730,729 - +0.5 730,729 - +0.9 731,039 - H281DRAFT_01825 0.27 +1.6 731,377 - H281DRAFT_01825 0.57 +0.6 731,377 - H281DRAFT_01825 0.57 +0.4 731,464 - H281DRAFT_01825 0.64 +0.4 731,630 - H281DRAFT_01825 0.79 +0.7 731,855 - +0.5 731,855 - +0.8 731,855 - -0.2 732,086 - -0.2 732,250 + +0.4 732,250 + -0.1 732,251 - -1.3 732,251 - +0.5 732,251 - -0.0 732,261 + +0.5 732,284 + -0.2 732,285 - -0.3 732,323 + +1.4 732,358 - -0.2 732,408 + +0.1 732,408 + -0.2 732,409 - -0.6 732,409 - +1.0 732,529 + +0.2 732,530 - -0.4 732,533 + +1.4 732,533 + +0.6 732,533 + -1.7 732,534 - -0.4 732,534 - +1.2 732,537 + -0.1 732,537 + -0.4 732,538 - +0.4 732,547 + +0.4 732,548 - +0.3 732,548 - -0.8 732,550 + +0.4 732,550 + +0.8 732,551 - +0.1 732,551 - -0.6 732,660 + -0.1 732,661 - +0.1 732,666 - +0.0 732,666 - +0.7 732,689 + +0.0 732,695 + -0.3 732,695 + +0.9 732,695 + +0.8 732,695 + +0.5 732,696 - -0.2 732,696 - -0.2 732,696 - +0.5 732,696 - -0.7 732,696 - +0.2 732,755 + -0.0
Or see this region's nucleotide sequence