Experiment: Hydroxy-L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00760 and H281DRAFT_00761 are separated by 47 nucleotides H281DRAFT_00761 and H281DRAFT_00762 are separated by 8 nucleotides H281DRAFT_00762 and H281DRAFT_00763 are separated by 175 nucleotides H281DRAFT_00763 and H281DRAFT_00764 are separated by 133 nucleotides
H281DRAFT_00760: H281DRAFT_00760 - sulfonate transport system ATP-binding protein, at 852,376 to 853,380
_00760
H281DRAFT_00761: H281DRAFT_00761 - molybdenum-pterin binding domain-containing protein, at 853,428 to 853,643
_00761
H281DRAFT_00762: H281DRAFT_00762 - hypothetical protein, at 853,652 to 853,984
_00762
H281DRAFT_00763: H281DRAFT_00763 - hypothetical protein, at 854,160 to 854,357
_00763
H281DRAFT_00764: H281DRAFT_00764 - hypothetical protein, at 854,491 to 854,733
_00764
Position (kb) 853
854 Strain fitness (log2 ratio) -2
-1
0
1
2 at 852.515 kb on - strand, within H281DRAFT_00760 at 852.613 kb on + strand, within H281DRAFT_00760 at 853.357 kb on - strand at 853.450 kb on + strand, within H281DRAFT_00761 at 853.641 kb on + strand at 853.641 kb on + strand at 854.037 kb on + strand at 854.127 kb on - strand at 854.127 kb on - strand at 854.137 kb on + strand at 854.254 kb on + strand, within H281DRAFT_00763 at 854.322 kb on - strand, within H281DRAFT_00763 at 854.334 kb on + strand, within H281DRAFT_00763 at 854.422 kb on + strand at 854.422 kb on + strand at 854.422 kb on + strand at 854.533 kb on + strand, within H281DRAFT_00764 at 854.542 kb on + strand, within H281DRAFT_00764 at 854.543 kb on - strand, within H281DRAFT_00764
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxy-L-Proline (C) remove 852,515 - H281DRAFT_00760 0.14 +1.0 852,613 + H281DRAFT_00760 0.24 +0.5 853,357 - -0.5 853,450 + H281DRAFT_00761 0.10 +0.6 853,641 + +1.2 853,641 + +0.0 854,037 + +0.2 854,127 - +0.0 854,127 - +0.0 854,137 + +0.5 854,254 + H281DRAFT_00763 0.47 +0.5 854,322 - H281DRAFT_00763 0.82 +0.4 854,334 + H281DRAFT_00763 0.88 -0.3 854,422 + -0.8 854,422 + -0.1 854,422 + -0.1 854,533 + H281DRAFT_00764 0.17 +0.7 854,542 + H281DRAFT_00764 0.21 -2.4 854,543 - H281DRAFT_00764 0.21 +1.9
Or see this region's nucleotide sequence