Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g137

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g135 and HP15_p187g136 are separated by 9 nucleotidesHP15_p187g136 and HP15_p187g137 are separated by 455 nucleotidesHP15_p187g137 and HP15_p187g139 are separated by 296 nucleotidesHP15_p187g139 and HP15_p187g138 overlap by 12 nucleotides HP15_p187g135: HP15_p187g135 - conserved hypothetical protein, at 138,838 to 139,626 _p187g135 HP15_p187g136: HP15_p187g136 - hypothetical protein, at 139,636 to 139,755 _p187g136 HP15_p187g137: HP15_p187g137 - outer membrane protein OprF, at 140,211 to 141,335 _p187g137 HP15_p187g139: HP15_p187g139 - hypothetical protein, at 141,632 to 141,796 _p187g139 HP15_p187g138: HP15_p187g138 - hypothetical protein, at 141,785 to 141,937 _p187g138 Position (kb) 140 141 142Strain fitness (log2 ratio) -2 -1 0 1 2at 139.213 kb on + strand, within HP15_p187g135at 139.215 kb on + strand, within HP15_p187g135at 139.252 kb on + strand, within HP15_p187g135at 139.257 kb on + strand, within HP15_p187g135at 139.260 kb on - strand, within HP15_p187g135at 139.271 kb on + strand, within HP15_p187g135at 139.271 kb on + strand, within HP15_p187g135at 139.279 kb on - strand, within HP15_p187g135at 139.281 kb on - strand, within HP15_p187g135at 139.294 kb on + strand, within HP15_p187g135at 139.294 kb on + strand, within HP15_p187g135at 139.294 kb on + strand, within HP15_p187g135at 139.294 kb on + strand, within HP15_p187g135at 139.302 kb on - strand, within HP15_p187g135at 139.302 kb on - strand, within HP15_p187g135at 139.302 kb on - strand, within HP15_p187g135at 139.302 kb on - strand, within HP15_p187g135at 139.330 kb on - strand, within HP15_p187g135at 139.426 kb on + strand, within HP15_p187g135at 139.426 kb on + strand, within HP15_p187g135at 139.434 kb on - strand, within HP15_p187g135at 139.447 kb on + strand, within HP15_p187g135at 139.447 kb on + strand, within HP15_p187g135at 139.447 kb on + strand, within HP15_p187g135at 139.447 kb on + strand, within HP15_p187g135at 139.447 kb on + strand, within HP15_p187g135at 139.447 kb on + strand, within HP15_p187g135at 139.455 kb on - strand, within HP15_p187g135at 139.455 kb on - strand, within HP15_p187g135at 139.470 kb on + strand, within HP15_p187g135at 139.476 kb on - strand, within HP15_p187g135at 139.508 kb on + strand, within HP15_p187g135at 139.529 kb on - strand, within HP15_p187g135at 139.532 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.542 kb on + strand, within HP15_p187g135at 139.550 kb on - strandat 139.550 kb on - strandat 139.550 kb on - strandat 139.550 kb on - strandat 139.550 kb on - strandat 139.550 kb on - strandat 139.550 kb on - strandat 139.552 kb on + strandat 139.553 kb on + strandat 139.553 kb on + strandat 139.566 kb on - strandat 139.587 kb on - strandat 139.587 kb on - strandat 139.587 kb on - strandat 139.621 kb on - strandat 139.642 kb on - strandat 139.667 kb on + strand, within HP15_p187g136at 139.679 kb on + strand, within HP15_p187g136at 139.742 kb on + strand, within HP15_p187g136at 139.747 kb on + strandat 139.750 kb on - strandat 139.750 kb on - strandat 139.752 kb on - strandat 139.787 kb on + strandat 139.787 kb on + strandat 139.795 kb on - strandat 139.795 kb on - strandat 139.795 kb on - strandat 139.799 kb on + strandat 139.801 kb on - strandat 139.804 kb on + strandat 139.807 kb on - strandat 139.807 kb on - strandat 139.812 kb on - strandat 139.812 kb on - strandat 139.834 kb on + strandat 139.834 kb on + strandat 139.834 kb on + strandat 139.834 kb on + strandat 139.842 kb on - strandat 139.842 kb on - strandat 139.891 kb on + strandat 139.901 kb on - strandat 139.916 kb on - strandat 139.970 kb on - strandat 140.013 kb on - strandat 140.067 kb on - strandat 140.131 kb on - strandat 140.139 kb on - strandat 140.189 kb on + strandat 140.189 kb on + strandat 140.189 kb on + strandat 140.189 kb on + strandat 140.189 kb on + strandat 140.197 kb on - strandat 140.197 kb on - strandat 140.202 kb on - strandat 140.217 kb on - strandat 140.311 kb on + strandat 140.319 kb on - strandat 140.377 kb on - strand, within HP15_p187g137at 140.499 kb on - strand, within HP15_p187g137at 140.518 kb on - strand, within HP15_p187g137at 140.560 kb on + strand, within HP15_p187g137at 140.568 kb on - strand, within HP15_p187g137at 140.568 kb on - strand, within HP15_p187g137at 140.568 kb on - strand, within HP15_p187g137at 140.568 kb on - strand, within HP15_p187g137at 140.570 kb on + strand, within HP15_p187g137at 140.578 kb on - strand, within HP15_p187g137at 140.607 kb on + strand, within HP15_p187g137at 140.622 kb on + strand, within HP15_p187g137at 140.666 kb on + strand, within HP15_p187g137at 140.666 kb on + strand, within HP15_p187g137at 140.680 kb on + strand, within HP15_p187g137at 140.684 kb on - strand, within HP15_p187g137at 140.685 kb on + strand, within HP15_p187g137at 140.686 kb on + strand, within HP15_p187g137at 140.689 kb on - strand, within HP15_p187g137at 140.694 kb on - strand, within HP15_p187g137at 140.694 kb on - strand, within HP15_p187g137at 140.703 kb on + strand, within HP15_p187g137at 140.703 kb on + strand, within HP15_p187g137at 140.703 kb on + strand, within HP15_p187g137at 140.711 kb on - strand, within HP15_p187g137at 140.711 kb on - strand, within HP15_p187g137at 140.711 kb on - strand, within HP15_p187g137at 140.720 kb on + strand, within HP15_p187g137at 140.720 kb on + strand, within HP15_p187g137at 140.728 kb on - strand, within HP15_p187g137at 140.745 kb on + strand, within HP15_p187g137at 140.745 kb on + strand, within HP15_p187g137at 140.745 kb on + strand, within HP15_p187g137at 140.769 kb on - strand, within HP15_p187g137at 140.803 kb on + strand, within HP15_p187g137at 140.803 kb on + strand, within HP15_p187g137at 140.811 kb on - strand, within HP15_p187g137at 140.811 kb on - strand, within HP15_p187g137at 140.811 kb on - strand, within HP15_p187g137at 140.891 kb on - strand, within HP15_p187g137at 140.910 kb on - strand, within HP15_p187g137at 140.911 kb on + strand, within HP15_p187g137at 140.919 kb on - strand, within HP15_p187g137at 140.923 kb on + strand, within HP15_p187g137at 140.936 kb on + strand, within HP15_p187g137at 140.936 kb on + strand, within HP15_p187g137at 140.936 kb on + strand, within HP15_p187g137at 140.944 kb on - strand, within HP15_p187g137at 140.944 kb on - strand, within HP15_p187g137at 140.944 kb on - strand, within HP15_p187g137at 140.957 kb on + strand, within HP15_p187g137at 140.965 kb on - strand, within HP15_p187g137at 140.989 kb on + strand, within HP15_p187g137at 140.989 kb on + strand, within HP15_p187g137at 140.989 kb on + strand, within HP15_p187g137at 140.989 kb on - strand, within HP15_p187g137at 140.991 kb on + strand, within HP15_p187g137at 140.997 kb on - strand, within HP15_p187g137at 140.997 kb on - strand, within HP15_p187g137at 141.018 kb on + strand, within HP15_p187g137at 141.020 kb on - strand, within HP15_p187g137at 141.048 kb on + strand, within HP15_p187g137at 141.056 kb on - strand, within HP15_p187g137at 141.130 kb on + strand, within HP15_p187g137at 141.130 kb on + strand, within HP15_p187g137at 141.130 kb on + strand, within HP15_p187g137at 141.135 kb on + strand, within HP15_p187g137at 141.138 kb on - strand, within HP15_p187g137at 141.138 kb on - strand, within HP15_p187g137at 141.138 kb on - strand, within HP15_p187g137at 141.138 kb on - strand, within HP15_p187g137at 141.138 kb on - strand, within HP15_p187g137at 141.153 kb on - strand, within HP15_p187g137at 141.252 kb on - strandat 141.258 kb on - strandat 141.259 kb on - strandat 141.411 kb on + strandat 141.416 kb on + strandat 141.416 kb on + strandat 141.424 kb on - strandat 141.424 kb on - strandat 141.424 kb on - strandat 141.424 kb on - strandat 141.450 kb on - strandat 141.457 kb on - strandat 141.458 kb on - strandat 141.458 kb on - strandat 141.464 kb on - strandat 141.491 kb on - strandat 141.491 kb on - strandat 141.524 kb on - strandat 141.636 kb on - strandat 141.648 kb on + strandat 141.679 kb on + strand, within HP15_p187g139at 141.692 kb on - strand, within HP15_p187g139at 141.746 kb on + strand, within HP15_p187g139at 141.769 kb on + strand, within HP15_p187g139at 141.777 kb on - strand, within HP15_p187g139at 141.777 kb on - strand, within HP15_p187g139at 141.777 kb on - strand, within HP15_p187g139at 141.795 kb on + strandat 141.829 kb on + strand, within HP15_p187g138at 141.892 kb on - strand, within HP15_p187g138at 141.941 kb on + strandat 141.949 kb on - strandat 141.949 kb on - strandat 142.020 kb on - strandat 142.039 kb on + strandat 142.067 kb on + strandat 142.067 kb on + strandat 142.067 kb on + strandat 142.075 kb on - strandat 142.110 kb on - strandat 142.132 kb on + strandat 142.133 kb on + strandat 142.140 kb on - strandat 142.141 kb on - strandat 142.191 kb on + strandat 142.227 kb on + strandat 142.257 kb on + strandat 142.259 kb on + strandat 142.266 kb on + strandat 142.275 kb on - strandat 142.298 kb on - strandat 142.303 kb on + strandat 142.308 kb on - strandat 142.311 kb on - strandat 142.320 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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139,213 + HP15_p187g135 0.48 -2.5
139,215 + HP15_p187g135 0.48 -0.4
139,252 + HP15_p187g135 0.52 -0.3
139,257 + HP15_p187g135 0.53 -0.1
139,260 - HP15_p187g135 0.53 -0.8
139,271 + HP15_p187g135 0.55 +0.5
139,271 + HP15_p187g135 0.55 -0.7
139,279 - HP15_p187g135 0.56 -0.3
139,281 - HP15_p187g135 0.56 -1.7
139,294 + HP15_p187g135 0.58 -0.7
139,294 + HP15_p187g135 0.58 -0.9
139,294 + HP15_p187g135 0.58 +0.2
139,294 + HP15_p187g135 0.58 +0.8
139,302 - HP15_p187g135 0.59 +1.0
139,302 - HP15_p187g135 0.59 +1.7
139,302 - HP15_p187g135 0.59 +1.2
139,302 - HP15_p187g135 0.59 -0.5
139,330 - HP15_p187g135 0.62 +0.8
139,426 + HP15_p187g135 0.75 +0.3
139,426 + HP15_p187g135 0.75 +0.3
139,434 - HP15_p187g135 0.76 -2.0
139,447 + HP15_p187g135 0.77 +1.1
139,447 + HP15_p187g135 0.77 +0.0
139,447 + HP15_p187g135 0.77 -0.1
139,447 + HP15_p187g135 0.77 -1.2
139,447 + HP15_p187g135 0.77 +1.9
139,447 + HP15_p187g135 0.77 +0.8
139,455 - HP15_p187g135 0.78 -0.3
139,455 - HP15_p187g135 0.78 +0.8
139,470 + HP15_p187g135 0.80 +0.3
139,476 - HP15_p187g135 0.81 +1.5
139,508 + HP15_p187g135 0.85 -0.5
139,529 - HP15_p187g135 0.88 -0.6
139,532 + HP15_p187g135 0.88 +0.9
139,542 + HP15_p187g135 0.89 +0.3
139,542 + HP15_p187g135 0.89 +0.2
139,542 + HP15_p187g135 0.89 +0.8
139,542 + HP15_p187g135 0.89 +1.7
139,542 + HP15_p187g135 0.89 -0.4
139,542 + HP15_p187g135 0.89 +0.6
139,542 + HP15_p187g135 0.89 -0.0
139,542 + HP15_p187g135 0.89 +0.5
139,542 + HP15_p187g135 0.89 +1.1
139,542 + HP15_p187g135 0.89 +0.0
139,550 - +1.5
139,550 - -2.0
139,550 - +1.3
139,550 - +0.8
139,550 - -0.2
139,550 - +0.3
139,550 - +2.1
139,552 + +1.9
139,553 + +0.1
139,553 + -0.7
139,566 - +1.5
139,587 - -0.3
139,587 - +0.2
139,587 - -1.7
139,621 - +0.3
139,642 - +1.4
139,667 + HP15_p187g136 0.26 +0.1
139,679 + HP15_p187g136 0.36 +0.3
139,742 + HP15_p187g136 0.88 -0.8
139,747 + +1.3
139,750 - +1.3
139,750 - -1.3
139,752 - -1.7
139,787 + +0.9
139,787 + -2.5
139,795 - +0.8
139,795 - -0.9
139,795 - +1.5
139,799 + -1.2
139,801 - -0.7
139,804 + +1.3
139,807 - +0.8
139,807 - -0.7
139,812 - -0.5
139,812 - +0.1
139,834 + -0.2
139,834 + -0.4
139,834 + -0.9
139,834 + -0.8
139,842 - +0.2
139,842 - -1.7
139,891 + +0.8
139,901 - +0.3
139,916 - +1.4
139,970 - +0.3
140,013 - -0.4
140,067 - +1.3
140,131 - +0.3
140,139 - +0.1
140,189 + -1.0
140,189 + +1.6
140,189 + +0.8
140,189 + -1.5
140,189 + +0.7
140,197 - -0.7
140,197 - +0.6
140,202 - -2.3
140,217 - -0.1
140,311 + +0.3
140,319 - +0.8
140,377 - HP15_p187g137 0.15 +1.9
140,499 - HP15_p187g137 0.26 +0.3
140,518 - HP15_p187g137 0.27 -0.5
140,560 + HP15_p187g137 0.31 -0.2
140,568 - HP15_p187g137 0.32 -0.3
140,568 - HP15_p187g137 0.32 -0.6
140,568 - HP15_p187g137 0.32 -0.2
140,568 - HP15_p187g137 0.32 +1.4
140,570 + HP15_p187g137 0.32 +0.8
140,578 - HP15_p187g137 0.33 +2.0
140,607 + HP15_p187g137 0.35 +0.0
140,622 + HP15_p187g137 0.37 -0.9
140,666 + HP15_p187g137 0.40 -0.7
140,666 + HP15_p187g137 0.40 +0.8
140,680 + HP15_p187g137 0.42 -1.5
140,684 - HP15_p187g137 0.42 -0.1
140,685 + HP15_p187g137 0.42 -0.5
140,686 + HP15_p187g137 0.42 -0.1
140,689 - HP15_p187g137 0.42 -0.7
140,694 - HP15_p187g137 0.43 -0.2
140,694 - HP15_p187g137 0.43 +0.3
140,703 + HP15_p187g137 0.44 +0.2
140,703 + HP15_p187g137 0.44 +1.6
140,703 + HP15_p187g137 0.44 -0.8
140,711 - HP15_p187g137 0.44 +0.2
140,711 - HP15_p187g137 0.44 +1.7
140,711 - HP15_p187g137 0.44 +0.3
140,720 + HP15_p187g137 0.45 -0.3
140,720 + HP15_p187g137 0.45 -0.1
140,728 - HP15_p187g137 0.46 +1.3
140,745 + HP15_p187g137 0.47 +0.3
140,745 + HP15_p187g137 0.47 -0.9
140,745 + HP15_p187g137 0.47 -0.2
140,769 - HP15_p187g137 0.50 -1.0
140,803 + HP15_p187g137 0.53 -1.2
140,803 + HP15_p187g137 0.53 +0.8
140,811 - HP15_p187g137 0.53 -0.2
140,811 - HP15_p187g137 0.53 +0.3
140,811 - HP15_p187g137 0.53 -0.4
140,891 - HP15_p187g137 0.60 +1.0
140,910 - HP15_p187g137 0.62 -0.9
140,911 + HP15_p187g137 0.62 -0.0
140,919 - HP15_p187g137 0.63 +1.7
140,923 + HP15_p187g137 0.63 -2.1
140,936 + HP15_p187g137 0.64 +0.3
140,936 + HP15_p187g137 0.64 -0.6
140,936 + HP15_p187g137 0.64 +1.1
140,944 - HP15_p187g137 0.65 -0.3
140,944 - HP15_p187g137 0.65 -1.5
140,944 - HP15_p187g137 0.65 +1.1
140,957 + HP15_p187g137 0.66 -1.4
140,965 - HP15_p187g137 0.67 -0.1
140,989 + HP15_p187g137 0.69 -0.8
140,989 + HP15_p187g137 0.69 -0.7
140,989 + HP15_p187g137 0.69 +1.3
140,989 - HP15_p187g137 0.69 -0.7
140,991 + HP15_p187g137 0.69 -2.5
140,997 - HP15_p187g137 0.70 +2.3
140,997 - HP15_p187g137 0.70 -1.2
141,018 + HP15_p187g137 0.72 -0.3
141,020 - HP15_p187g137 0.72 -0.7
141,048 + HP15_p187g137 0.74 +0.9
141,056 - HP15_p187g137 0.75 +0.3
141,130 + HP15_p187g137 0.82 +0.3
141,130 + HP15_p187g137 0.82 +2.3
141,130 + HP15_p187g137 0.82 +1.2
141,135 + HP15_p187g137 0.82 -0.1
141,138 - HP15_p187g137 0.82 -0.2
141,138 - HP15_p187g137 0.82 +1.1
141,138 - HP15_p187g137 0.82 -1.2
141,138 - HP15_p187g137 0.82 +0.8
141,138 - HP15_p187g137 0.82 +0.6
141,153 - HP15_p187g137 0.84 -0.4
141,252 - -0.2
141,258 - -1.1
141,259 - -0.6
141,411 + +0.1
141,416 + +0.9
141,416 + -0.7
141,424 - -1.5
141,424 - -1.7
141,424 - -2.7
141,424 - -0.4
141,450 - +0.3
141,457 - +2.6
141,458 - +1.7
141,458 - -1.7
141,464 - +2.0
141,491 - +1.8
141,491 - +0.3
141,524 - -0.2
141,636 - -0.2
141,648 + +0.0
141,679 + HP15_p187g139 0.28 +1.3
141,692 - HP15_p187g139 0.36 +0.8
141,746 + HP15_p187g139 0.69 +0.3
141,769 + HP15_p187g139 0.83 -0.5
141,777 - HP15_p187g139 0.88 +0.3
141,777 - HP15_p187g139 0.88 +0.3
141,777 - HP15_p187g139 0.88 -0.3
141,795 + +1.6
141,829 + HP15_p187g138 0.29 -0.1
141,892 - HP15_p187g138 0.70 -0.5
141,941 + +0.3
141,949 - +2.2
141,949 - -0.4
142,020 - +0.3
142,039 + -0.6
142,067 + +0.8
142,067 + +1.6
142,067 + +0.2
142,075 - +0.3
142,110 - +1.9
142,132 + -0.3
142,133 + +0.4
142,140 - +1.7
142,141 - +2.2
142,191 + +1.0
142,227 + -0.2
142,257 + -0.1
142,259 + +0.3
142,266 + +1.1
142,275 - +0.7
142,298 - +0.3
142,303 + -1.0
142,308 - -1.2
142,311 - +0.3
142,320 - +2.1

Or see this region's nucleotide sequence