Strain Fitness in Marinobacter adhaerens HP15 around HP15_3394

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3393 and HP15_3394 are separated by 11 nucleotidesHP15_3394 and HP15_3395 are separated by 29 nucleotidesHP15_3395 and HP15_3396 overlap by 8 nucleotides HP15_3393: HP15_3393 - glycosyl transferase, group 1, at 3,564,209 to 3,565,327 _3393 HP15_3394: HP15_3394 - major facilitator superfamily MFS_1, at 3,565,339 to 3,566,490 _3394 HP15_3395: HP15_3395 - conserved hypothetical protein CHP00245, at 3,566,520 to 3,567,311 _3395 HP15_3396: HP15_3396 - ABC transporter, at 3,567,304 to 3,567,903 _3396 Position (kb) 3565 3566 3567Strain fitness (log2 ratio) -1 0 1 2at 3564.364 kb on - strand, within HP15_3393at 3564.449 kb on + strand, within HP15_3393at 3564.504 kb on - strand, within HP15_3393at 3564.514 kb on - strand, within HP15_3393at 3564.527 kb on + strand, within HP15_3393at 3564.571 kb on + strand, within HP15_3393at 3564.571 kb on - strand, within HP15_3393at 3564.590 kb on - strand, within HP15_3393at 3564.592 kb on + strand, within HP15_3393at 3564.745 kb on + strand, within HP15_3393at 3564.753 kb on - strand, within HP15_3393at 3564.753 kb on - strand, within HP15_3393at 3564.924 kb on + strand, within HP15_3393at 3564.926 kb on + strand, within HP15_3393at 3564.934 kb on - strand, within HP15_3393at 3564.957 kb on + strand, within HP15_3393at 3564.957 kb on + strand, within HP15_3393at 3565.051 kb on + strand, within HP15_3393at 3565.069 kb on + strand, within HP15_3393at 3565.174 kb on + strand, within HP15_3393at 3565.196 kb on + strand, within HP15_3393at 3565.204 kb on + strand, within HP15_3393at 3565.346 kb on + strandat 3565.346 kb on + strandat 3565.372 kb on - strandat 3565.372 kb on - strandat 3565.418 kb on + strandat 3565.436 kb on + strandat 3565.436 kb on + strandat 3565.478 kb on - strand, within HP15_3394at 3565.500 kb on + strand, within HP15_3394at 3565.511 kb on - strand, within HP15_3394at 3565.522 kb on - strand, within HP15_3394at 3565.580 kb on + strand, within HP15_3394at 3565.676 kb on - strand, within HP15_3394at 3565.712 kb on - strand, within HP15_3394at 3565.712 kb on - strand, within HP15_3394at 3565.789 kb on + strand, within HP15_3394at 3565.822 kb on + strand, within HP15_3394at 3565.832 kb on - strand, within HP15_3394at 3565.889 kb on + strand, within HP15_3394at 3565.956 kb on - strand, within HP15_3394at 3565.970 kb on + strand, within HP15_3394at 3565.975 kb on - strand, within HP15_3394at 3566.012 kb on - strand, within HP15_3394at 3566.035 kb on + strand, within HP15_3394at 3566.035 kb on + strand, within HP15_3394at 3566.035 kb on + strand, within HP15_3394at 3566.047 kb on + strand, within HP15_3394at 3566.047 kb on + strand, within HP15_3394at 3566.050 kb on - strand, within HP15_3394at 3566.065 kb on + strand, within HP15_3394at 3566.116 kb on - strand, within HP15_3394at 3566.133 kb on + strand, within HP15_3394at 3566.177 kb on + strand, within HP15_3394at 3566.293 kb on + strand, within HP15_3394at 3566.301 kb on - strand, within HP15_3394at 3566.301 kb on - strand, within HP15_3394at 3566.365 kb on - strand, within HP15_3394at 3566.402 kb on + strandat 3566.414 kb on - strandat 3566.498 kb on + strandat 3566.578 kb on - strandat 3566.593 kb on + strandat 3566.731 kb on + strand, within HP15_3395at 3566.936 kb on + strand, within HP15_3395at 3566.936 kb on + strand, within HP15_3395at 3566.937 kb on + strand, within HP15_3395at 3566.954 kb on + strand, within HP15_3395at 3566.954 kb on + strand, within HP15_3395at 3566.954 kb on + strand, within HP15_3395at 3566.954 kb on + strand, within HP15_3395at 3566.962 kb on - strand, within HP15_3395at 3566.962 kb on - strand, within HP15_3395at 3567.045 kb on + strand, within HP15_3395at 3567.053 kb on - strand, within HP15_3395at 3567.176 kb on - strand, within HP15_3395at 3567.325 kb on + strandat 3567.381 kb on - strand, within HP15_3396at 3567.384 kb on + strand, within HP15_3396at 3567.384 kb on + strand, within HP15_3396at 3567.384 kb on + strand, within HP15_3396at 3567.384 kb on + strand, within HP15_3396at 3567.392 kb on - strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.395 kb on + strand, within HP15_3396at 3567.403 kb on - strand, within HP15_3396at 3567.403 kb on - strand, within HP15_3396at 3567.403 kb on - strand, within HP15_3396at 3567.475 kb on - strand, within HP15_3396

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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3,564,364 - HP15_3393 0.14 -1.3
3,564,449 + HP15_3393 0.21 +1.3
3,564,504 - HP15_3393 0.26 -0.7
3,564,514 - HP15_3393 0.27 +1.9
3,564,527 + HP15_3393 0.28 -0.1
3,564,571 + HP15_3393 0.32 -0.3
3,564,571 - HP15_3393 0.32 -0.5
3,564,590 - HP15_3393 0.34 +0.9
3,564,592 + HP15_3393 0.34 +1.3
3,564,745 + HP15_3393 0.48 -0.5
3,564,753 - HP15_3393 0.49 +0.3
3,564,753 - HP15_3393 0.49 -0.1
3,564,924 + HP15_3393 0.64 -0.9
3,564,926 + HP15_3393 0.64 -0.3
3,564,934 - HP15_3393 0.65 -0.3
3,564,957 + HP15_3393 0.67 +0.3
3,564,957 + HP15_3393 0.67 -0.8
3,565,051 + HP15_3393 0.75 -0.1
3,565,069 + HP15_3393 0.77 +0.3
3,565,174 + HP15_3393 0.86 -0.3
3,565,196 + HP15_3393 0.88 -0.2
3,565,204 + HP15_3393 0.89 -0.9
3,565,346 + +1.5
3,565,346 + -0.1
3,565,372 - +1.6
3,565,372 - -0.0
3,565,418 + +0.4
3,565,436 + -0.5
3,565,436 + -0.6
3,565,478 - HP15_3394 0.12 +0.1
3,565,500 + HP15_3394 0.14 +0.1
3,565,511 - HP15_3394 0.15 +2.1
3,565,522 - HP15_3394 0.16 +1.6
3,565,580 + HP15_3394 0.21 +0.2
3,565,676 - HP15_3394 0.29 +1.1
3,565,712 - HP15_3394 0.32 +1.8
3,565,712 - HP15_3394 0.32 -0.4
3,565,789 + HP15_3394 0.39 +0.5
3,565,822 + HP15_3394 0.42 +0.3
3,565,832 - HP15_3394 0.43 +0.3
3,565,889 + HP15_3394 0.48 -1.1
3,565,956 - HP15_3394 0.54 +2.3
3,565,970 + HP15_3394 0.55 +1.4
3,565,975 - HP15_3394 0.55 +0.7
3,566,012 - HP15_3394 0.58 +0.5
3,566,035 + HP15_3394 0.60 -1.3
3,566,035 + HP15_3394 0.60 -0.1
3,566,035 + HP15_3394 0.60 +1.2
3,566,047 + HP15_3394 0.61 +0.6
3,566,047 + HP15_3394 0.61 +2.0
3,566,050 - HP15_3394 0.62 +1.5
3,566,065 + HP15_3394 0.63 +0.0
3,566,116 - HP15_3394 0.67 -0.3
3,566,133 + HP15_3394 0.69 -0.8
3,566,177 + HP15_3394 0.73 -0.4
3,566,293 + HP15_3394 0.83 +1.6
3,566,301 - HP15_3394 0.84 +0.5
3,566,301 - HP15_3394 0.84 +1.5
3,566,365 - HP15_3394 0.89 +1.7
3,566,402 + +0.1
3,566,414 - -0.4
3,566,498 + -0.2
3,566,578 - -0.5
3,566,593 + +0.9
3,566,731 + HP15_3395 0.27 +0.7
3,566,936 + HP15_3395 0.53 -1.1
3,566,936 + HP15_3395 0.53 -0.8
3,566,937 + HP15_3395 0.53 -0.0
3,566,954 + HP15_3395 0.55 +2.2
3,566,954 + HP15_3395 0.55 +2.6
3,566,954 + HP15_3395 0.55 +2.0
3,566,954 + HP15_3395 0.55 +1.9
3,566,962 - HP15_3395 0.56 -0.1
3,566,962 - HP15_3395 0.56 +2.1
3,567,045 + HP15_3395 0.66 +0.3
3,567,053 - HP15_3395 0.67 +0.5
3,567,176 - HP15_3395 0.83 +0.9
3,567,325 + +1.8
3,567,381 - HP15_3396 0.13 +1.1
3,567,384 + HP15_3396 0.13 -0.1
3,567,384 + HP15_3396 0.13 -0.7
3,567,384 + HP15_3396 0.13 -0.3
3,567,384 + HP15_3396 0.13 +1.7
3,567,392 - HP15_3396 0.15 +0.3
3,567,395 + HP15_3396 0.15 -0.1
3,567,395 + HP15_3396 0.15 +1.6
3,567,395 + HP15_3396 0.15 -0.3
3,567,395 + HP15_3396 0.15 -0.1
3,567,395 + HP15_3396 0.15 +1.9
3,567,395 + HP15_3396 0.15 +1.7
3,567,395 + HP15_3396 0.15 +1.6
3,567,403 - HP15_3396 0.17 +1.7
3,567,403 - HP15_3396 0.17 +0.5
3,567,403 - HP15_3396 0.17 +1.4
3,567,475 - HP15_3396 0.28 +0.7

Or see this region's nucleotide sequence