Strain Fitness in Marinobacter adhaerens HP15 around HP15_2895

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2894 and HP15_2895 are separated by 65 nucleotidesHP15_2895 and HP15_2896 overlap by 4 nucleotides HP15_2894: HP15_2894 - conserved hypothetical protein, at 3,029,454 to 3,030,419 _2894 HP15_2895: HP15_2895 - integral membrane protein, at 3,030,485 to 3,031,543 _2895 HP15_2896: HP15_2896 - glycosyltransferase, at 3,031,540 to 3,033,783 _2896 Position (kb) 3030 3031 3032Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3029.575 kb on - strand, within HP15_2894at 3029.637 kb on - strand, within HP15_2894at 3029.639 kb on + strand, within HP15_2894at 3029.667 kb on - strand, within HP15_2894at 3029.761 kb on + strand, within HP15_2894at 3029.769 kb on - strand, within HP15_2894at 3029.913 kb on - strand, within HP15_2894at 3029.916 kb on + strand, within HP15_2894at 3029.963 kb on + strand, within HP15_2894at 3029.963 kb on + strand, within HP15_2894at 3030.067 kb on + strand, within HP15_2894at 3030.075 kb on - strand, within HP15_2894at 3030.075 kb on - strand, within HP15_2894at 3030.111 kb on + strand, within HP15_2894at 3030.119 kb on - strand, within HP15_2894at 3030.146 kb on + strand, within HP15_2894at 3030.166 kb on + strand, within HP15_2894at 3030.235 kb on - strand, within HP15_2894at 3030.270 kb on - strand, within HP15_2894at 3030.436 kb on + strandat 3030.442 kb on + strandat 3030.442 kb on + strandat 3030.442 kb on + strandat 3030.443 kb on + strandat 3030.444 kb on - strandat 3030.449 kb on - strandat 3030.450 kb on - strandat 3030.481 kb on + strandat 3030.481 kb on + strandat 3030.481 kb on + strandat 3030.486 kb on + strandat 3030.580 kb on + strandat 3030.699 kb on + strand, within HP15_2895at 3030.733 kb on - strand, within HP15_2895at 3030.829 kb on + strand, within HP15_2895at 3030.954 kb on - strand, within HP15_2895at 3031.273 kb on + strand, within HP15_2895at 3031.284 kb on + strand, within HP15_2895at 3031.292 kb on - strand, within HP15_2895at 3031.292 kb on - strand, within HP15_2895at 3031.322 kb on - strand, within HP15_2895at 3031.774 kb on - strand, within HP15_2896at 3031.845 kb on - strand, within HP15_2896at 3031.957 kb on + strand, within HP15_2896at 3032.059 kb on + strand, within HP15_2896at 3032.067 kb on - strand, within HP15_2896at 3032.086 kb on - strand, within HP15_2896at 3032.211 kb on - strand, within HP15_2896at 3032.307 kb on - strand, within HP15_2896at 3032.381 kb on + strand, within HP15_2896at 3032.389 kb on - strand, within HP15_2896at 3032.456 kb on - strand, within HP15_2896at 3032.456 kb on - strand, within HP15_2896at 3032.456 kb on - strand, within HP15_2896

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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3,029,575 - HP15_2894 0.13 +1.0
3,029,637 - HP15_2894 0.19 +0.0
3,029,639 + HP15_2894 0.19 +1.1
3,029,667 - HP15_2894 0.22 -0.5
3,029,761 + HP15_2894 0.32 +0.0
3,029,769 - HP15_2894 0.33 -0.7
3,029,913 - HP15_2894 0.48 +0.4
3,029,916 + HP15_2894 0.48 -0.9
3,029,963 + HP15_2894 0.53 -0.1
3,029,963 + HP15_2894 0.53 -0.4
3,030,067 + HP15_2894 0.63 +1.6
3,030,075 - HP15_2894 0.64 +1.2
3,030,075 - HP15_2894 0.64 +0.9
3,030,111 + HP15_2894 0.68 -0.3
3,030,119 - HP15_2894 0.69 -1.6
3,030,146 + HP15_2894 0.72 -1.1
3,030,166 + HP15_2894 0.74 -1.0
3,030,235 - HP15_2894 0.81 -0.8
3,030,270 - HP15_2894 0.84 -2.1
3,030,436 + +0.5
3,030,442 + -1.8
3,030,442 + -0.4
3,030,442 + +0.1
3,030,443 + -0.3
3,030,444 - -0.5
3,030,449 - +1.4
3,030,450 - +0.4
3,030,481 + -0.2
3,030,481 + -0.5
3,030,481 + -0.3
3,030,486 + -1.0
3,030,580 + -0.3
3,030,699 + HP15_2895 0.20 +0.9
3,030,733 - HP15_2895 0.23 -0.6
3,030,829 + HP15_2895 0.32 -0.1
3,030,954 - HP15_2895 0.44 -1.4
3,031,273 + HP15_2895 0.74 -0.5
3,031,284 + HP15_2895 0.75 -1.3
3,031,292 - HP15_2895 0.76 -0.8
3,031,292 - HP15_2895 0.76 +0.0
3,031,322 - HP15_2895 0.79 -0.8
3,031,774 - HP15_2896 0.10 +2.8
3,031,845 - HP15_2896 0.14 +0.9
3,031,957 + HP15_2896 0.19 -0.7
3,032,059 + HP15_2896 0.23 +1.5
3,032,067 - HP15_2896 0.23 -0.2
3,032,086 - HP15_2896 0.24 +0.1
3,032,211 - HP15_2896 0.30 +0.1
3,032,307 - HP15_2896 0.34 -1.9
3,032,381 + HP15_2896 0.37 +2.4
3,032,389 - HP15_2896 0.38 +0.1
3,032,456 - HP15_2896 0.41 -0.5
3,032,456 - HP15_2896 0.41 +0.1
3,032,456 - HP15_2896 0.41 +1.2

Or see this region's nucleotide sequence