Strain Fitness in Marinobacter adhaerens HP15 around HP15_2349

Experiment: L-Phenylalanine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2348 and HP15_2349 are separated by 260 nucleotidesHP15_2349 and HP15_2350 are separated by 17 nucleotides HP15_2348: HP15_2348 - conserved hypothetical protein, at 2,471,648 to 2,472,628 _2348 HP15_2349: HP15_2349 - phosphoribosylaminoimidazole carboxylase catalytic subunit, at 2,472,889 to 2,473,416 _2349 HP15_2350: HP15_2350 - phosphoribosylaminoimidazole carboxylase ATPase subunit, at 2,473,434 to 2,474,552 _2350 Position (kb) 2472 2473 2474Strain fitness (log2 ratio) -2 -1 0 1at 2472.036 kb on + strand, within HP15_2348at 2472.044 kb on + strand, within HP15_2348at 2472.164 kb on + strand, within HP15_2348at 2472.599 kb on - strandat 2472.668 kb on + strandat 2472.749 kb on - strandat 2473.394 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine
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2,472,036 + HP15_2348 0.40 +0.5
2,472,044 + HP15_2348 0.40 -0.8
2,472,164 + HP15_2348 0.53 +0.5
2,472,599 - -1.5
2,472,668 + +1.0
2,472,749 - -0.2
2,473,394 + -2.5

Or see this region's nucleotide sequence