Strain Fitness in Dechlorosoma suillum PS around Dsui_3230

Experiment: ALP with perchlorate 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with perchlorate 6 mM
3,467,617	-				-0.7
3,467,660	-				-1.1
3,467,667	+				+0.3
3,467,714	+				-1.3
3,467,722	-				+0.3
3,467,722	-				+0.3
3,467,722	-				-2.0
3,467,763	-		Dsui_3229	0.12	-0.1
3,467,805	+				-1.3
3,467,812	-		Dsui_3229	0.17	-2.3
3,467,820	+				-1.3
3,467,828	-		Dsui_3229	0.19	-0.9
3,467,950	+				+0.3
3,468,133	-		Dsui_3229	0.51	-1.0
3,468,149	+				+0.3
3,468,861	-		Dsui_3230	0.10	-1.9
3,469,179	+				-1.3
3,469,206	-		Dsui_3230	0.24	+0.3
3,469,233	-		Dsui_3230	0.25	-0.2
3,469,260	-		Dsui_3230	0.26	-1.7
3,469,337	+				-0.7
3,469,414	-		Dsui_3230	0.32	+0.3
3,469,552	-				-0.7
3,469,576	+		Dsui_3230	0.38	-2.5
3,469,632	-		Dsui_3230	0.40	-2.7
3,469,632	-		Dsui_3230	0.40	-2.0
3,469,634	-		Dsui_3230	0.40	+0.6
3,469,695	-		Dsui_3230	0.43	-0.7
3,469,758	-		Dsui_3230	0.45	+0.9
3,469,836	+				-1.3
3,469,844	-				+1.3
3,469,994	-		Dsui_3230	0.54	-2.3
3,469,994	-				+0.3
3,470,131	-		Dsui_3230	0.60	-0.3
3,470,292	-		Dsui_3230	0.66	-1.3
3,470,331	-		Dsui_3230	0.67	-1.6
3,470,413	+				+0.3
3,470,472	-		Dsui_3230	0.73	-0.7
3,470,477	-		Dsui_3230	0.73	-0.7
3,470,583	-		Dsui_3230	0.77	-2.9
3,470,710	-		Dsui_3230	0.82	-2.3
3,470,760	-		Dsui_3230	0.84	-1.3
3,470,924	-				-1.3
3,470,973	+				+0.3
3,470,981	-				-0.3
3,471,041	-				-0.7
3,471,154	+				+0.3
3,471,245	-				-0.0
3,471,245	-				+0.1
3,471,245	-				-0.5
3,471,333	-				-1.3
3,471,353	-				+0.3
3,471,433	-				-2.9
3,471,485	+				+0.3
3,471,493	-				-1.3
3,471,602	-				+0.3
3,471,718	-				+0.3
3,471,734	+				-1.3
3,471,901	+				+0.3
3,471,901	+		Dsui_3231	0.20	-2.5