Strain Fitness in Dechlorosoma suillum PS around Dsui_3125

Experiment: ALP with perchlorate 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with perchlorate 6 mM
3,345,428	+		Dsui_3123	0.66	+0.2
3,345,459	-		Dsui_3123	0.68	-2.5
3,345,596	-		Dsui_3123	0.79	-0.7
3,345,653	+		Dsui_3123	0.83	+0.1
3,345,676	+		Dsui_3123	0.85	-0.1
3,345,700	+		Dsui_3123	0.87	-0.2
3,345,700	+		Dsui_3123	0.87	+0.1
3,345,752	+				+0.2
3,345,753	+				-0.6
3,345,775	+				+0.5
3,345,788	-				-1.7
3,345,904	+				-0.7
3,345,910	+				+0.0
3,345,959	+		Dsui_3124	0.20	+0.1
3,345,987	+		Dsui_3124	0.27	-0.2
3,345,987	+		Dsui_3124	0.27	+0.1
3,346,058	-		Dsui_3124	0.46	-0.7
3,346,354	+				+1.3
3,346,621	-		Dsui_3125	0.13	-1.3
3,346,813	-		Dsui_3125	0.25	-0.7
3,346,816	+		Dsui_3125	0.25	+0.3
3,346,824	-		Dsui_3125	0.26	-2.0
3,346,825	-		Dsui_3125	0.26	+0.3
3,346,832	-		Dsui_3125	0.26	-1.7
3,346,846	+		Dsui_3125	0.27	-2.7
3,346,933	+		Dsui_3125	0.33	-0.7
3,346,941	-		Dsui_3125	0.33	-3.2
3,346,941	-		Dsui_3125	0.33	-2.3
3,346,967	+		Dsui_3125	0.35	-0.7
3,346,975	-		Dsui_3125	0.35	+0.3
3,347,108	-		Dsui_3125	0.44	+0.3
3,347,120	+		Dsui_3125	0.44	-3.4
3,347,140	-		Dsui_3125	0.46	+0.3
3,347,193	+				+0.3
3,347,265	+		Dsui_3125	0.53	-1.7
3,347,274	-		Dsui_3125	0.54	-1.3
3,347,382	+		Dsui_3125	0.61	-1.7
3,347,492	+		Dsui_3125	0.68	-0.7
3,347,765	+		Dsui_3125	0.85	-2.7
3,347,772	-		Dsui_3125	0.85	-2.3
3,347,773	-		Dsui_3125	0.85	-2.0
3,347,991	-				-1.3
3,348,188	+				+0.3
3,348,190	-		Dsui_3126	0.16	+0.3
3,348,252	+		Dsui_3126	0.21	-1.7
3,348,269	+				+0.3
3,348,317	+		Dsui_3126	0.27	-1.3
3,348,381	-		Dsui_3126	0.32	-1.3
3,348,400	-		Dsui_3126	0.34	-0.7
3,348,418	-		Dsui_3126	0.35	-0.7
3,348,461	-		Dsui_3126	0.39	-2.7
3,348,521	+				+0.3
3,348,599	+				+0.3
3,348,604	+		Dsui_3126	0.51	+0.3
3,348,607	-				+0.3
3,348,612	-		Dsui_3126	0.52	-0.7
3,348,668	+		Dsui_3126	0.57	-0.7
3,348,761	+				-0.7
3,348,769	-		Dsui_3126	0.66	-2.0
3,348,853	-		Dsui_3126	0.73	+0.3
3,348,918	-		Dsui_3126	0.78	+0.3
3,348,923	-		Dsui_3126	0.79	-0.7
3,348,969	-		Dsui_3126	0.83	-1.7
3,348,987	+		Dsui_3126	0.84	-1.3