Strain Fitness in Dechlorosoma suillum PS around Dsui_3002

Experiment: ALP with perchlorate 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with perchlorate 6 mM
3,211,444	-				-0.0
3,211,503	+		Dsui_3001	0.15	+0.3
3,211,546	-		Dsui_3001	0.19	-0.1
3,211,639	+		Dsui_3001	0.28	-0.7
3,211,690	+		Dsui_3001	0.33	+0.3
3,211,874	+		Dsui_3001	0.51	+0.3
3,212,231	-		Dsui_3001	0.85	-0.2
3,212,231	-		Dsui_3001	0.85	+0.3
3,212,231	-		Dsui_3001	0.85	-0.9
3,212,232	+				+0.3
3,212,246	+		Dsui_3001	0.87	+0.3
3,212,331	+				-1.3
3,212,331	+				+0.3
3,212,331	+				-0.7
3,212,331	+				-0.7
3,212,331	+				-2.0
3,212,331	+				+0.3
3,212,441	+				-1.3
3,212,518	+				+0.3
3,212,518	+				-1.7
3,212,526	-				-1.3
3,212,536	-				-1.7
3,212,595	+				-1.0
3,212,702	-		Dsui_3002	0.13	-1.3
3,212,917	+		Dsui_3002	0.21	-1.7
3,212,938	+		Dsui_3002	0.22	-0.7
3,212,939	-		Dsui_3002	0.22	+0.3
3,212,943	+		Dsui_3002	0.22	+0.3
3,213,003	-		Dsui_3002	0.24	-2.0
3,213,008	-		Dsui_3002	0.25	-0.7
3,213,036	-		Dsui_3002	0.26	+0.3
3,213,036	-		Dsui_3002	0.26	-2.9
3,213,227	-		Dsui_3002	0.33	+0.3
3,213,258	+		Dsui_3002	0.34	-1.3
3,213,560	-		Dsui_3002	0.46	-1.7
3,213,665	+		Dsui_3002	0.50	-0.7
3,213,788	-		Dsui_3002	0.55	+0.3
3,213,788	-		Dsui_3002	0.55	-0.7
3,213,872	+		Dsui_3002	0.59	-1.3
3,213,912	-		Dsui_3002	0.60	-3.5
3,214,099	-		Dsui_3002	0.67	+0.3
3,214,121	+		Dsui_3002	0.68	-2.3
3,214,171	+				+0.3
3,214,191	+		Dsui_3002	0.71	-1.3
3,214,226	-		Dsui_3002	0.72	-2.5
3,214,255	-		Dsui_3002	0.74	-0.7
3,214,282	+		Dsui_3002	0.75	+0.3
3,214,325	-		Dsui_3002	0.76	+0.3
3,214,396	-		Dsui_3002	0.79	-2.0
3,214,399	-		Dsui_3002	0.79	-1.5
3,214,440	-		Dsui_3002	0.81	+0.3
3,214,494	+		Dsui_3002	0.83	+0.3
3,214,494	+		Dsui_3002	0.83	+0.3
3,214,505	+		Dsui_3002	0.83	+0.3
3,214,544	-		Dsui_3002	0.85	+0.3
3,214,553	+		Dsui_3002	0.85	-0.7
3,214,561	-		Dsui_3002	0.86	-1.1
3,214,613	-		Dsui_3002	0.88	-1.8
3,214,637	-		Dsui_3002	0.89	-0.4
3,214,668	-		Dsui_3002	0.90	-2.0
3,214,725	-				+0.3
3,214,728	-				-2.0
3,214,767	-				-0.6
3,214,772	+				-0.7
3,214,780	-				-1.0
3,214,792	+				-1.7
3,214,849	-				-2.9
3,214,907	-				+0.3
3,214,927	+				-1.3
3,214,928	+				-1.7
3,215,080	-				+0.0
3,215,116	-				-0.3
3,215,164	-				+0.0
3,215,173	+				+0.3
3,215,218	-		Dsui_3003	0.10	+0.2
3,215,279	-		Dsui_3003	0.14	+0.1
3,215,321	-		Dsui_3003	0.16	-0.1
3,215,341	-		Dsui_3003	0.17	+0.1
3,215,344	+		Dsui_3003	0.17	-1.7
3,215,355	-		Dsui_3003	0.17	-0.3
3,215,450	-		Dsui_3003	0.22	-0.1
3,215,684	+				+0.3
3,215,695	+		Dsui_3003	0.35	-0.7
3,215,762	-		Dsui_3003	0.39	-0.3
3,215,882	+		Dsui_3003	0.45	-0.7
3,215,882	+		Dsui_3003	0.45	+0.3
3,215,890	-		Dsui_3003	0.45	+0.1
3,215,890	-		Dsui_3003	0.45	+0.1