Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2633 and Dsui_2634 are separated by 674 nucleotides Dsui_2634 and Dsui_2635 overlap by 4 nucleotides
Dsui_2633: Dsui_2633 - hypothetical protein, at 2,783,766 to 2,784,023
_2633
Dsui_2634: Dsui_2634 - cytochrome c, mono- and diheme variants family, at 2,784,698 to 2,785,084
_2634
Dsui_2635: Dsui_2635 - heavy metal efflux pump, cobalt-zinc-cadmium, at 2,785,081 to 2,788,215
_2635
Position (kb)
2784
2785
2786 Strain fitness (log2 ratio)
-2
-1
0
1 at 2783.705 kb on + strand at 2783.705 kb on + strand at 2783.708 kb on - strand at 2783.852 kb on - strand, within Dsui_2633 at 2783.872 kb on + strand, within Dsui_2633 at 2783.904 kb on + strand, within Dsui_2633 at 2783.967 kb on + strand, within Dsui_2633 at 2783.975 kb on - strand, within Dsui_2633 at 2783.975 kb on - strand, within Dsui_2633 at 2783.976 kb on - strand, within Dsui_2633 at 2783.987 kb on + strand, within Dsui_2633 at 2784.000 kb on + strand at 2784.055 kb on - strand at 2784.071 kb on + strand at 2784.084 kb on - strand at 2784.092 kb on + strand at 2784.100 kb on - strand at 2784.100 kb on - strand at 2784.144 kb on + strand at 2784.157 kb on - strand at 2784.159 kb on + strand at 2784.159 kb on + strand at 2784.215 kb on - strand at 2784.217 kb on - strand at 2784.359 kb on + strand at 2784.472 kb on - strand at 2784.509 kb on - strand at 2784.553 kb on - strand at 2784.711 kb on + strand at 2785.004 kb on + strand, within Dsui_2634 at 2785.010 kb on + strand, within Dsui_2634 at 2785.029 kb on - strand, within Dsui_2634 at 2785.029 kb on - strand, within Dsui_2634 at 2785.217 kb on - strand at 2785.320 kb on + strand at 2785.473 kb on + strand, within Dsui_2635 at 2785.474 kb on - strand, within Dsui_2635 at 2785.547 kb on - strand, within Dsui_2635 at 2785.588 kb on + strand, within Dsui_2635 at 2785.773 kb on - strand, within Dsui_2635 at 2785.773 kb on - strand, within Dsui_2635 at 2785.881 kb on + strand, within Dsui_2635 at 2785.984 kb on + strand, within Dsui_2635 at 2786.046 kb on - strand, within Dsui_2635
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 2,783,705 + -0.5 2,783,705 + -1.1 2,783,708 - -2.7 2,783,852 - Dsui_2633 0.33 +0.5 2,783,872 + Dsui_2633 0.41 -0.5 2,783,904 + Dsui_2633 0.53 -1.1 2,783,967 + Dsui_2633 0.78 -1.8 2,783,975 - Dsui_2633 0.81 +0.5 2,783,975 - Dsui_2633 0.81 +0.5 2,783,976 - Dsui_2633 0.81 +0.5 2,783,987 + Dsui_2633 0.86 -1.5 2,784,000 + -1.1 2,784,055 - +0.5 2,784,071 + +0.5 2,784,084 - +0.5 2,784,092 + -1.8 2,784,100 - +0.5 2,784,100 - +0.5 2,784,144 + -1.5 2,784,157 - +0.5 2,784,159 + +0.5 2,784,159 + +0.5 2,784,215 - -0.5 2,784,217 - -0.5 2,784,359 + -1.1 2,784,472 - -1.2 2,784,509 - -1.5 2,784,553 - -1.5 2,784,711 + +0.5 2,785,004 + Dsui_2634 0.79 -0.5 2,785,010 + Dsui_2634 0.81 +0.5 2,785,029 - Dsui_2634 0.86 -0.5 2,785,029 - Dsui_2634 0.86 -0.5 2,785,217 - +0.5 2,785,320 + +0.5 2,785,473 + Dsui_2635 0.13 -1.1 2,785,474 - Dsui_2635 0.13 +0.5 2,785,547 - Dsui_2635 0.15 -1.1 2,785,588 + Dsui_2635 0.16 +0.5 2,785,773 - Dsui_2635 0.22 -0.5 2,785,773 - Dsui_2635 0.22 +0.5 2,785,881 + Dsui_2635 0.26 -1.1 2,785,984 + Dsui_2635 0.29 -0.5 2,786,046 - Dsui_2635 0.31 -0.5
Or see this region's nucleotide sequence