Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2493 and Dsui_2494 are separated by 71 nucleotides Dsui_2494 and Dsui_2495 are separated by 15 nucleotides Dsui_2495 and Dsui_2496 are separated by 2 nucleotides Dsui_2496 and Dsui_2497 overlap by 4 nucleotides
Dsui_2493: Dsui_2493 - Hg(II)-responsive transcriptional regulator, at 2,643,733 to 2,644,167
_2493
Dsui_2494: Dsui_2494 - MerT mercuric transport protein, at 2,644,239 to 2,644,589
_2494
Dsui_2495: Dsui_2495 - mercuric transport protein periplasmic component, at 2,644,605 to 2,644,880
_2495
Dsui_2496: Dsui_2496 - Membrane transport protein MerF, at 2,644,883 to 2,645,128
_2496
Dsui_2497: Dsui_2497 - mercuric reductase, at 2,645,125 to 2,646,771
_2497
Position (kb)
2644
2645 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2643.730 kb on + strand at 2643.733 kb on - strand at 2643.738 kb on - strand at 2643.834 kb on - strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.884 kb on + strand, within Dsui_2493 at 2643.892 kb on - strand, within Dsui_2493 at 2643.910 kb on + strand, within Dsui_2493 at 2643.963 kb on + strand at 2643.970 kb on + strand, within Dsui_2493 at 2643.971 kb on - strand, within Dsui_2493 at 2644.060 kb on - strand, within Dsui_2493 at 2644.084 kb on - strand, within Dsui_2493 at 2644.098 kb on - strand, within Dsui_2493 at 2644.210 kb on + strand at 2644.269 kb on + strand at 2644.665 kb on + strand, within Dsui_2495 at 2644.672 kb on + strand, within Dsui_2495 at 2644.674 kb on + strand, within Dsui_2495 at 2644.680 kb on - strand, within Dsui_2495 at 2644.692 kb on + strand, within Dsui_2495 at 2644.700 kb on - strand, within Dsui_2495 at 2644.742 kb on + strand, within Dsui_2495 at 2644.798 kb on + strand, within Dsui_2495 at 2644.801 kb on - strand at 2644.809 kb on + strand, within Dsui_2495 at 2644.832 kb on + strand, within Dsui_2495 at 2644.866 kb on - strand at 2644.869 kb on + strand at 2644.869 kb on + strand at 2644.869 kb on + strand at 2644.877 kb on - strand at 2644.909 kb on + strand, within Dsui_2496 at 2644.953 kb on + strand, within Dsui_2496 at 2645.024 kb on - strand at 2645.084 kb on + strand, within Dsui_2496 at 2645.146 kb on + strand at 2645.146 kb on + strand at 2645.151 kb on + strand at 2645.151 kb on + strand at 2645.213 kb on + strand at 2645.255 kb on - strand at 2645.526 kb on + strand, within Dsui_2497 at 2645.634 kb on + strand, within Dsui_2497 at 2645.634 kb on + strand, within Dsui_2497 at 2645.637 kb on - strand at 2645.736 kb on + strand, within Dsui_2497 at 2645.740 kb on - strand, within Dsui_2497 at 2645.740 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 2,643,730 + +0.0 2,643,733 - +0.4 2,643,738 - -0.6 2,643,834 - Dsui_2493 0.23 -0.6 2,643,845 + Dsui_2493 0.26 +0.3 2,643,845 + Dsui_2493 0.26 -0.6 2,643,884 + Dsui_2493 0.35 -0.6 2,643,892 - Dsui_2493 0.37 +1.2 2,643,910 + Dsui_2493 0.41 +1.0 2,643,963 + +1.4 2,643,970 + Dsui_2493 0.54 +0.1 2,643,971 - Dsui_2493 0.55 -0.4 2,644,060 - Dsui_2493 0.75 -0.5 2,644,084 - Dsui_2493 0.81 +0.9 2,644,098 - Dsui_2493 0.84 -0.3 2,644,210 + -3.3 2,644,269 + +0.4 2,644,665 + Dsui_2495 0.22 -1.6 2,644,672 + Dsui_2495 0.24 +0.4 2,644,674 + Dsui_2495 0.25 +0.4 2,644,680 - Dsui_2495 0.27 -2.4 2,644,692 + Dsui_2495 0.32 -0.6 2,644,700 - Dsui_2495 0.34 +0.4 2,644,742 + Dsui_2495 0.50 -1.6 2,644,798 + Dsui_2495 0.70 -1.6 2,644,801 - +0.4 2,644,809 + Dsui_2495 0.74 +0.4 2,644,832 + Dsui_2495 0.82 -1.6 2,644,866 - +0.4 2,644,869 + -0.6 2,644,869 + -1.6 2,644,869 + -2.1 2,644,877 - -0.6 2,644,909 + Dsui_2496 0.11 +0.4 2,644,953 + Dsui_2496 0.28 +0.4 2,645,024 - +0.4 2,645,084 + Dsui_2496 0.82 +0.4 2,645,146 + +0.4 2,645,146 + +0.4 2,645,151 + +0.4 2,645,151 + -2.4 2,645,213 + -0.6 2,645,255 - -1.1 2,645,526 + Dsui_2497 0.24 +0.4 2,645,634 + Dsui_2497 0.31 -1.6 2,645,634 + Dsui_2497 0.31 +0.4 2,645,637 - +0.4 2,645,736 + Dsui_2497 0.37 +0.4 2,645,740 - Dsui_2497 0.37 -1.1 2,645,740 - -0.6
Or see this region's nucleotide sequence