Strain Fitness in Dechlorosoma suillum PS around Dsui_2220
Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 6 mM |
---|---|---|---|---|---|
remove | |||||
2,360,795 | + | +0.5 | |||
2,360,795 | + | +0.3 | |||
2,360,843 | + | +0.2 | |||
2,360,946 | + | +1.2 | |||
2,360,951 | + | -0.4 | |||
2,360,959 | - | -0.4 | |||
2,360,973 | + | -0.4 | |||
2,361,024 | - | +0.6 | |||
2,361,028 | - | +0.3 | |||
2,361,092 | + | Dsui_2220 | 0.28 | -1.0 | |
2,361,136 | + | +0.6 | |||
2,361,141 | - | Dsui_2220 | 0.44 | +0.6 | |
2,361,180 | + | +0.6 | |||
2,361,180 | - | Dsui_2220 | 0.56 | -1.4 | |
2,361,188 | - | Dsui_2220 | 0.58 | -1.4 | |
2,361,279 | - | Dsui_2220 | 0.87 | +0.6 | |
2,361,377 | + | +0.6 | |||
2,361,476 | + | +0.6 | |||
2,361,479 | - | -0.4 | |||
2,361,484 | - | -0.4 | |||
2,361,484 | - | -1.4 | |||
2,361,491 | + | +0.6 | |||
2,361,538 | - | -1.0 | |||
2,361,565 | + | +0.8 | |||
2,361,608 | - | +0.6 | |||
2,361,680 | - | -1.0 | |||
2,361,833 | - | +0.6 | |||
2,361,917 | + | Dsui_2221 | 0.29 | +0.5 | |
2,362,164 | + | Dsui_2221 | 0.51 | -0.3 | |
2,362,233 | + | Dsui_2221 | 0.57 | +1.0 | |
2,362,233 | + | Dsui_2221 | 0.57 | +0.8 | |
2,362,302 | + | Dsui_2221 | 0.64 | +0.4 |
Or see this region's nucleotide sequence