Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2174 and Dsui_2175 are separated by 113 nucleotides Dsui_2175 and Dsui_2176 are separated by 147 nucleotides
Dsui_2174: Dsui_2174 - putative signal transduction protein, at 2,309,746 to 2,310,600
_2174
Dsui_2175: Dsui_2175 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,310,714 to 2,312,354
_2175
Dsui_2176: Dsui_2176 - putative esterase of the alpha-beta hydrolase superfamily, at 2,312,502 to 2,313,542
_2176
Position (kb)
2310
2311
2312
2313 Strain fitness (log2 ratio)
-2
-1
0
1 at 2309.770 kb on - strand at 2309.781 kb on - strand at 2309.866 kb on + strand at 2309.866 kb on + strand at 2309.874 kb on - strand, within Dsui_2174 at 2309.874 kb on - strand, within Dsui_2174 at 2309.879 kb on - strand, within Dsui_2174 at 2309.896 kb on + strand, within Dsui_2174 at 2309.904 kb on - strand, within Dsui_2174 at 2309.908 kb on + strand, within Dsui_2174 at 2309.945 kb on - strand, within Dsui_2174 at 2309.946 kb on + strand at 2309.989 kb on + strand at 2310.257 kb on + strand at 2310.265 kb on - strand, within Dsui_2174 at 2310.265 kb on - strand, within Dsui_2174 at 2310.305 kb on - strand, within Dsui_2174 at 2310.415 kb on - strand, within Dsui_2174 at 2310.451 kb on - strand, within Dsui_2174 at 2310.501 kb on - strand, within Dsui_2174 at 2310.617 kb on - strand at 2312.352 kb on - strand at 2312.368 kb on - strand at 2312.457 kb on + strand at 2312.466 kb on - strand at 2312.585 kb on + strand at 2312.613 kb on - strand at 2312.701 kb on - strand at 2312.701 kb on - strand, within Dsui_2176 at 2312.748 kb on + strand, within Dsui_2176 at 2312.774 kb on + strand, within Dsui_2176 at 2312.779 kb on + strand, within Dsui_2176 at 2312.800 kb on + strand, within Dsui_2176 at 2312.936 kb on + strand at 2313.083 kb on + strand, within Dsui_2176 at 2313.213 kb on - strand, within Dsui_2176 at 2313.217 kb on + strand, within Dsui_2176 at 2313.229 kb on + strand, within Dsui_2176 at 2313.351 kb on + strand, within Dsui_2176
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 2,309,770 - -0.1 2,309,781 - +0.5 2,309,866 + +0.8 2,309,866 + +0.8 2,309,874 - Dsui_2174 0.15 +0.5 2,309,874 - Dsui_2174 0.15 +1.5 2,309,879 - Dsui_2174 0.16 +0.1 2,309,896 + Dsui_2174 0.18 -2.0 2,309,904 - Dsui_2174 0.18 +0.8 2,309,908 + Dsui_2174 0.19 -1.2 2,309,945 - Dsui_2174 0.23 +0.4 2,309,946 + +0.8 2,309,989 + +0.8 2,310,257 + -0.2 2,310,265 - Dsui_2174 0.61 +0.9 2,310,265 - Dsui_2174 0.61 -0.3 2,310,305 - Dsui_2174 0.65 -1.2 2,310,415 - Dsui_2174 0.78 +0.5 2,310,451 - Dsui_2174 0.82 +0.5 2,310,501 - Dsui_2174 0.88 +0.1 2,310,617 - +0.4 2,312,352 - +0.3 2,312,368 - +0.4 2,312,457 + -0.8 2,312,466 - +0.2 2,312,585 + +0.8 2,312,613 - +0.8 2,312,701 - +0.8 2,312,701 - Dsui_2176 0.19 +0.8 2,312,748 + Dsui_2176 0.24 -0.2 2,312,774 + Dsui_2176 0.26 -0.2 2,312,779 + Dsui_2176 0.27 -0.2 2,312,800 + Dsui_2176 0.29 -0.2 2,312,936 + -0.2 2,313,083 + Dsui_2176 0.56 -0.2 2,313,213 - Dsui_2176 0.68 -2.0 2,313,217 + Dsui_2176 0.69 -0.2 2,313,229 + Dsui_2176 0.70 +0.8 2,313,351 + Dsui_2176 0.82 +0.8
Or see this region's nucleotide sequence