Strain Fitness in Dechlorosoma suillum PS around Dsui_2078
Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 6 mM |
---|---|---|---|---|---|
remove | |||||
2,197,777 | + | Dsui_2077 | 0.64 | -1.6 | |
2,197,814 | + | Dsui_2077 | 0.66 | -0.9 | |
2,197,839 | + | Dsui_2077 | 0.68 | +0.7 | |
2,197,977 | + | Dsui_2077 | 0.77 | +0.7 | |
2,197,996 | + | Dsui_2077 | 0.79 | -0.3 | |
2,198,054 | - | +0.7 | |||
2,198,069 | - | +0.7 | |||
2,198,095 | + | Dsui_2077 | 0.85 | -0.9 | |
2,198,236 | - | -0.3 | |||
2,198,265 | + | -0.9 | |||
2,198,316 | - | -0.3 | |||
2,198,320 | + | +0.7 | |||
2,198,423 | + | -1.3 | |||
2,198,426 | - | -0.3 | |||
2,198,490 | - | -1.3 | |||
2,198,538 | + | Dsui_2078 | 0.23 | -1.9 | |
2,198,543 | + | Dsui_2078 | 0.25 | -1.3 | |
2,198,543 | + | -0.3 | |||
2,198,551 | - | Dsui_2078 | 0.28 | -2.5 | |
2,198,567 | - | Dsui_2078 | 0.33 | -0.9 | |
2,198,603 | + | -0.3 | |||
2,198,624 | + | +0.7 | |||
2,198,624 | + | Dsui_2078 | 0.51 | +0.7 | |
2,198,624 | + | Dsui_2078 | 0.51 | -0.3 | |
2,198,776 | + | -0.3 | |||
2,198,986 | + | -0.9 | |||
2,199,037 | + | +0.7 | |||
2,199,091 | - | -0.3 | |||
2,199,172 | - | +0.7 | |||
2,199,179 | + | +0.7 | |||
2,199,216 | - | +0.7 | |||
2,199,447 | - | +0.7 | |||
2,199,651 | - | +0.7 | |||
2,199,701 | + | Dsui_2079 | 0.43 | +1.3 | |
2,199,709 | - | Dsui_2079 | 0.44 | -0.3 | |
2,199,755 | + | Dsui_2079 | 0.46 | -0.9 |
Or see this region's nucleotide sequence