Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1045 and Dsui_1046 are separated by 4 nucleotides Dsui_1046 and Dsui_1047 are separated by 3 nucleotides Dsui_1047 and Dsui_1048 are separated by 328 nucleotides
Dsui_1045: Dsui_1045 - hypothetical protein, at 1,078,872 to 1,079,318
_1045
Dsui_1046: Dsui_1046 - hypothetical protein, at 1,079,323 to 1,080,141
_1046
Dsui_1047: Dsui_1047 - Rhodanese-related sulfurtransferase, at 1,080,145 to 1,080,597
_1047
Dsui_1048: Dsui_1048 - glutamine synthetase, type I, at 1,080,926 to 1,082,338
_1048
Position (kb)
1080
1081 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1079.185 kb on - strand, within Dsui_1045 at 1079.185 kb on - strand, within Dsui_1045 at 1079.245 kb on + strand, within Dsui_1045 at 1079.264 kb on + strand, within Dsui_1045 at 1079.315 kb on - strand at 1079.361 kb on + strand at 1079.362 kb on + strand at 1079.362 kb on + strand at 1079.362 kb on + strand at 1079.362 kb on + strand at 1079.362 kb on + strand at 1079.370 kb on - strand at 1079.370 kb on - strand at 1079.430 kb on + strand, within Dsui_1046 at 1079.446 kb on + strand at 1079.591 kb on - strand, within Dsui_1046 at 1079.624 kb on + strand, within Dsui_1046 at 1079.624 kb on + strand at 1079.654 kb on + strand, within Dsui_1046 at 1079.654 kb on + strand, within Dsui_1046 at 1079.654 kb on + strand, within Dsui_1046 at 1079.664 kb on - strand, within Dsui_1046 at 1079.694 kb on - strand, within Dsui_1046 at 1079.752 kb on + strand, within Dsui_1046 at 1079.754 kb on - strand at 1079.776 kb on - strand, within Dsui_1046 at 1079.781 kb on + strand, within Dsui_1046 at 1079.837 kb on + strand, within Dsui_1046 at 1079.912 kb on - strand, within Dsui_1046 at 1080.143 kb on + strand at 1080.241 kb on + strand, within Dsui_1047 at 1080.249 kb on + strand, within Dsui_1047 at 1080.250 kb on - strand, within Dsui_1047 at 1080.386 kb on + strand, within Dsui_1047 at 1080.434 kb on + strand, within Dsui_1047 at 1080.442 kb on - strand, within Dsui_1047 at 1080.442 kb on - strand, within Dsui_1047 at 1080.447 kb on - strand, within Dsui_1047 at 1080.457 kb on - strand, within Dsui_1047 at 1080.464 kb on + strand, within Dsui_1047 at 1080.506 kb on - strand, within Dsui_1047 at 1080.530 kb on + strand, within Dsui_1047 at 1080.538 kb on - strand, within Dsui_1047 at 1080.554 kb on + strand at 1080.630 kb on + strand at 1080.681 kb on + strand at 1080.705 kb on + strand at 1080.705 kb on + strand at 1080.713 kb on - strand at 1080.713 kb on - strand at 1080.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 1,079,185 - Dsui_1045 0.70 -1.2 1,079,185 - Dsui_1045 0.70 -0.6 1,079,245 + Dsui_1045 0.83 -2.6 1,079,264 + Dsui_1045 0.88 -1.9 1,079,315 - -1.2 1,079,361 + +0.4 1,079,362 + +0.4 1,079,362 + -2.4 1,079,362 + -0.4 1,079,362 + +0.4 1,079,362 + -1.2 1,079,370 - -1.2 1,079,370 - -0.6 1,079,430 + Dsui_1046 0.13 +0.4 1,079,446 + +1.4 1,079,591 - Dsui_1046 0.33 +0.4 1,079,624 + Dsui_1046 0.37 -1.7 1,079,624 + +0.4 1,079,654 + Dsui_1046 0.40 +0.8 1,079,654 + Dsui_1046 0.40 +0.6 1,079,654 + Dsui_1046 0.40 -0.1 1,079,664 - Dsui_1046 0.42 -0.7 1,079,694 - Dsui_1046 0.45 +0.4 1,079,752 + Dsui_1046 0.52 +1.4 1,079,754 - +0.4 1,079,776 - Dsui_1046 0.55 -2.2 1,079,781 + Dsui_1046 0.56 -0.0 1,079,837 + Dsui_1046 0.63 -0.6 1,079,912 - Dsui_1046 0.72 -0.6 1,080,143 + -0.6 1,080,241 + Dsui_1047 0.21 -0.6 1,080,249 + Dsui_1047 0.23 -0.6 1,080,250 - Dsui_1047 0.23 +1.7 1,080,386 + Dsui_1047 0.53 +0.4 1,080,434 + Dsui_1047 0.64 +0.4 1,080,442 - Dsui_1047 0.66 +1.8 1,080,442 - Dsui_1047 0.66 +1.8 1,080,447 - Dsui_1047 0.67 +1.9 1,080,457 - Dsui_1047 0.69 +1.7 1,080,464 + Dsui_1047 0.70 +0.4 1,080,506 - Dsui_1047 0.80 +1.8 1,080,530 + Dsui_1047 0.85 +0.4 1,080,538 - Dsui_1047 0.87 +0.8 1,080,554 + +0.4 1,080,630 + +0.4 1,080,681 + -0.6 1,080,705 + +0.4 1,080,705 + -1.6 1,080,713 - +0.4 1,080,713 - +0.4 1,080,852 - +0.4
Or see this region's nucleotide sequence