Strain Fitness in Dechlorosoma suillum PS around Dsui_1040
Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 6 mM |
---|---|---|---|---|---|
remove | |||||
1,071,570 | + | +0.1 | |||
1,071,804 | + | Dsui_1040 | 0.20 | -0.3 | |
1,071,896 | - | Dsui_1040 | 0.30 | +0.4 | |
1,071,956 | + | Dsui_1040 | 0.37 | +0.5 | |
1,071,989 | + | Dsui_1040 | 0.40 | -0.2 | |
1,072,035 | + | Dsui_1040 | 0.45 | +0.2 | |
1,072,105 | + | Dsui_1040 | 0.53 | +0.4 | |
1,072,181 | + | Dsui_1040 | 0.61 | +2.4 | |
1,072,187 | + | Dsui_1040 | 0.62 | -0.0 | |
1,072,269 | - | Dsui_1040 | 0.71 | -1.6 | |
1,072,351 | + | Dsui_1040 | 0.80 | +0.0 | |
1,072,466 | + | +0.3 | |||
1,072,484 | + | +0.2 | |||
1,072,491 | - | -1.5 | |||
1,072,530 | - | -0.2 | |||
1,072,671 | + | +2.0 | |||
1,072,698 | + | Dsui_1041 | 0.12 | -0.6 | |
1,072,724 | - | Dsui_1041 | 0.14 | -0.9 | |
1,072,813 | + | Dsui_1041 | 0.22 | -1.2 | |
1,072,868 | + | Dsui_1041 | 0.27 | -1.2 | |
1,072,913 | + | Dsui_1041 | 0.31 | -1.9 | |
1,072,942 | + | Dsui_1041 | 0.33 | -0.3 | |
1,073,053 | + | Dsui_1041 | 0.43 | +0.4 | |
1,073,280 | + | Dsui_1041 | 0.62 | -0.6 | |
1,073,364 | - | Dsui_1041 | 0.69 | -0.1 | |
1,073,526 | + | +0.4 |
Or see this region's nucleotide sequence