Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0951 and Dsui_0952 are separated by 126 nucleotides Dsui_0952 and Dsui_0953 are separated by 94 nucleotides
Dsui_0951: Dsui_0951 - nucleoside-diphosphate-sugar epimerase, at 976,773 to 977,732
_0951
Dsui_0952: Dsui_0952 - chemotaxis protein, at 977,859 to 978,482
_0952
Dsui_0953: Dsui_0953 - ADP-ribosyl-(dinitrogen reductase) hydrolase, at 978,577 to 979,500
_0953
Position (kb) 977
978
979 Strain fitness (log2 ratio) -2
-1
0
1 at 976.893 kb on + strand, within Dsui_0951 at 976.893 kb on + strand, within Dsui_0951 at 977.020 kb on - strand, within Dsui_0951 at 977.048 kb on + strand, within Dsui_0951 at 977.399 kb on - strand, within Dsui_0951 at 977.430 kb on + strand, within Dsui_0951 at 977.432 kb on - strand, within Dsui_0951 at 977.568 kb on - strand, within Dsui_0951 at 977.590 kb on + strand, within Dsui_0951 at 977.590 kb on + strand, within Dsui_0951 at 977.598 kb on - strand, within Dsui_0951 at 977.632 kb on - strand, within Dsui_0951 at 977.666 kb on + strand at 977.666 kb on + strand at 977.672 kb on + strand at 977.676 kb on + strand at 977.684 kb on - strand at 977.695 kb on + strand at 977.752 kb on + strand at 977.850 kb on - strand at 977.865 kb on - strand at 977.889 kb on - strand at 977.942 kb on - strand, within Dsui_0952 at 977.962 kb on + strand, within Dsui_0952 at 978.105 kb on + strand, within Dsui_0952 at 978.143 kb on + strand at 978.143 kb on + strand, within Dsui_0952 at 978.151 kb on - strand, within Dsui_0952 at 978.156 kb on - strand, within Dsui_0952 at 978.165 kb on + strand, within Dsui_0952 at 978.172 kb on - strand, within Dsui_0952 at 978.316 kb on + strand at 978.316 kb on + strand at 978.316 kb on + strand, within Dsui_0952 at 978.349 kb on - strand, within Dsui_0952 at 978.419 kb on + strand, within Dsui_0952 at 978.419 kb on + strand at 978.427 kb on - strand at 978.463 kb on - strand at 978.499 kb on - strand at 978.728 kb on - strand, within Dsui_0953 at 978.754 kb on - strand, within Dsui_0953 at 978.831 kb on + strand, within Dsui_0953 at 978.836 kb on - strand at 978.963 kb on + strand, within Dsui_0953 at 978.971 kb on - strand, within Dsui_0953 at 979.038 kb on - strand at 979.213 kb on + strand, within Dsui_0953 at 979.379 kb on - strand, within Dsui_0953
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 976,893 + Dsui_0951 0.12 -0.0 976,893 + Dsui_0951 0.12 +0.3 977,020 - Dsui_0951 0.26 -1.6 977,048 + Dsui_0951 0.29 +0.1 977,399 - Dsui_0951 0.65 +0.4 977,430 + Dsui_0951 0.68 -0.2 977,432 - Dsui_0951 0.69 +0.4 977,568 - Dsui_0951 0.83 -2.2 977,590 + Dsui_0951 0.85 -0.3 977,590 + Dsui_0951 0.85 -1.2 977,598 - Dsui_0951 0.86 -2.4 977,632 - Dsui_0951 0.89 -0.6 977,666 + -0.4 977,666 + -0.0 977,672 + +0.2 977,676 + +0.3 977,684 - +0.4 977,695 + -0.1 977,752 + -2.6 977,850 - -0.6 977,865 - -0.6 977,889 - -0.6 977,942 - Dsui_0952 0.13 -1.2 977,962 + Dsui_0952 0.17 +0.4 978,105 + Dsui_0952 0.39 -2.2 978,143 + +0.4 978,143 + Dsui_0952 0.46 -0.6 978,151 - Dsui_0952 0.47 -1.6 978,156 - Dsui_0952 0.48 +0.1 978,165 + Dsui_0952 0.49 -0.6 978,172 - Dsui_0952 0.50 -0.6 978,316 + -0.6 978,316 + +0.4 978,316 + Dsui_0952 0.73 +0.5 978,349 - Dsui_0952 0.79 +0.4 978,419 + Dsui_0952 0.90 -0.6 978,419 + +0.4 978,427 - -1.2 978,463 - +0.4 978,499 - +0.4 978,728 - Dsui_0953 0.16 -1.6 978,754 - Dsui_0953 0.19 -1.2 978,831 + Dsui_0953 0.27 +0.4 978,836 - +0.4 978,963 + Dsui_0953 0.42 -0.6 978,971 - Dsui_0953 0.43 -1.0 979,038 - +0.4 979,213 + Dsui_0953 0.69 -1.2 979,379 - Dsui_0953 0.87 -0.6
Or see this region's nucleotide sequence