Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0836 and Dsui_0837 are separated by 64 nucleotides Dsui_0837 and Dsui_0838 are separated by 77 nucleotides
Dsui_0836: Dsui_0836 - membrane protein insertase, YidC/Oxa1 family, N-terminal domain protein, at 849,426 to 851,081
_0836
Dsui_0837: Dsui_0837 - tRNA modification GTPase TrmE, at 851,146 to 852,498
_0837
Dsui_0838: Dsui_0838 - hypothetical protein, at 852,576 to 853,673
_0838
Position (kb) 851
852
853 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 851.006 kb on + strand at 851.075 kb on + strand at 851.075 kb on + strand at 851.083 kb on - strand at 851.083 kb on - strand at 851.083 kb on - strand at 851.083 kb on - strand at 851.129 kb on + strand at 851.217 kb on - strand at 851.348 kb on + strand, within Dsui_0837 at 851.351 kb on - strand at 851.394 kb on + strand at 851.438 kb on + strand, within Dsui_0837 at 851.442 kb on + strand, within Dsui_0837 at 851.446 kb on - strand at 851.520 kb on + strand, within Dsui_0837 at 851.660 kb on - strand at 851.671 kb on - strand at 851.803 kb on + strand, within Dsui_0837 at 851.839 kb on - strand at 851.839 kb on - strand, within Dsui_0837 at 851.907 kb on + strand, within Dsui_0837 at 851.977 kb on + strand, within Dsui_0837 at 852.251 kb on + strand, within Dsui_0837 at 852.441 kb on + strand at 852.477 kb on - strand at 852.568 kb on + strand at 852.568 kb on - strand at 852.597 kb on - strand at 852.609 kb on - strand at 852.646 kb on - strand at 852.727 kb on - strand, within Dsui_0838 at 852.771 kb on - strand at 852.774 kb on + strand, within Dsui_0838 at 852.860 kb on + strand at 852.860 kb on + strand, within Dsui_0838 at 852.929 kb on + strand, within Dsui_0838 at 852.950 kb on + strand at 853.004 kb on + strand at 853.058 kb on - strand at 853.147 kb on + strand, within Dsui_0838 at 853.147 kb on + strand, within Dsui_0838 at 853.188 kb on - strand, within Dsui_0838 at 853.226 kb on - strand, within Dsui_0838 at 853.241 kb on - strand at 853.243 kb on + strand, within Dsui_0838 at 853.244 kb on + strand, within Dsui_0838 at 853.252 kb on - strand at 853.253 kb on + strand, within Dsui_0838 at 853.263 kb on + strand, within Dsui_0838 at 853.289 kb on - strand, within Dsui_0838 at 853.296 kb on - strand at 853.425 kb on + strand, within Dsui_0838 at 853.460 kb on + strand, within Dsui_0838 at 853.485 kb on + strand, within Dsui_0838 at 853.485 kb on + strand, within Dsui_0838 at 853.488 kb on - strand, within Dsui_0838
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 851,006 + -0.1 851,075 + +0.2 851,075 + +0.1 851,083 - -2.6 851,083 - -0.6 851,083 - +0.4 851,083 - -1.6 851,129 + +2.0 851,217 - +0.4 851,348 + Dsui_0837 0.15 -0.6 851,351 - -1.2 851,394 + +0.4 851,438 + Dsui_0837 0.22 -1.9 851,442 + Dsui_0837 0.22 -2.4 851,446 - +0.4 851,520 + Dsui_0837 0.28 -1.2 851,660 - -0.6 851,671 - +0.4 851,803 + Dsui_0837 0.49 -0.9 851,839 - +0.4 851,839 - Dsui_0837 0.51 -0.6 851,907 + Dsui_0837 0.56 -2.4 851,977 + Dsui_0837 0.61 -1.9 852,251 + Dsui_0837 0.82 -1.9 852,441 + -2.4 852,477 - -1.6 852,568 + -0.7 852,568 - -1.2 852,597 - +0.4 852,609 - -0.6 852,646 - +0.4 852,727 - Dsui_0838 0.14 +0.4 852,771 - +0.4 852,774 + Dsui_0838 0.18 -0.6 852,860 + +0.4 852,860 + Dsui_0838 0.26 +0.4 852,929 + Dsui_0838 0.32 -0.6 852,950 + +0.4 853,004 + +0.4 853,058 - +0.4 853,147 + Dsui_0838 0.52 -1.9 853,147 + Dsui_0838 0.52 -1.6 853,188 - Dsui_0838 0.56 -0.6 853,226 - Dsui_0838 0.59 +0.4 853,241 - +0.4 853,243 + Dsui_0838 0.61 -1.2 853,244 + Dsui_0838 0.61 -0.6 853,252 - -1.2 853,253 + Dsui_0838 0.62 +0.4 853,263 + Dsui_0838 0.63 -1.2 853,289 - Dsui_0838 0.65 -1.6 853,296 - +0.4 853,425 + Dsui_0838 0.77 -0.6 853,460 + Dsui_0838 0.81 -1.6 853,485 + Dsui_0838 0.83 -3.1 853,485 + Dsui_0838 0.83 -1.2 853,488 - Dsui_0838 0.83 -3.2
Or see this region's nucleotide sequence