Strain Fitness in Dechlorosoma suillum PS around Dsui_0765

Experiment: ALP with perchlorate 6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0763 and Dsui_0764 are separated by 13 nucleotidesDsui_0764 and Dsui_0765 are separated by 60 nucleotidesDsui_0765 and Dsui_0766 are separated by 317 nucleotides Dsui_0763: Dsui_0763 - ammonium transporter, at 764,379 to 765,779 _0763 Dsui_0764: Dsui_0764 - nitrogen regulatory protein PII, at 765,793 to 766,131 _0764 Dsui_0765: Dsui_0765 - conserved hypothetical protein, proteobacterial, at 766,192 to 766,977 _0765 Dsui_0766: Dsui_0766 - hypothetical protein, at 767,295 to 767,531 _0766 Position (kb) 766 767Strain fitness (log2 ratio) -3 -2 -1 0 1at 765.201 kb on + strand, within Dsui_0763at 765.219 kb on - strandat 765.274 kb on - strand, within Dsui_0763at 765.324 kb on + strandat 765.362 kb on + strandat 765.393 kb on + strand, within Dsui_0763at 765.427 kb on - strand, within Dsui_0763at 765.493 kb on - strandat 765.507 kb on + strandat 765.507 kb on + strandat 765.517 kb on + strand, within Dsui_0763at 765.517 kb on + strand, within Dsui_0763at 765.522 kb on + strand, within Dsui_0763at 765.525 kb on - strand, within Dsui_0763at 765.525 kb on - strand, within Dsui_0763at 765.530 kb on - strand, within Dsui_0763at 765.533 kb on + strand, within Dsui_0763at 765.541 kb on - strand, within Dsui_0763at 765.542 kb on - strandat 765.575 kb on + strandat 765.742 kb on + strandat 765.761 kb on - strandat 765.761 kb on - strandat 765.761 kb on - strandat 765.781 kb on + strandat 765.859 kb on + strandat 765.861 kb on - strandat 765.895 kb on + strand, within Dsui_0764at 765.952 kb on - strand, within Dsui_0764at 765.994 kb on + strand, within Dsui_0764at 766.028 kb on + strand, within Dsui_0764at 766.028 kb on + strand, within Dsui_0764at 766.036 kb on - strandat 766.044 kb on + strand, within Dsui_0764at 766.046 kb on + strand, within Dsui_0764at 766.123 kb on - strandat 766.182 kb on - strandat 766.210 kb on + strandat 766.218 kb on - strandat 766.221 kb on - strandat 766.223 kb on - strandat 766.258 kb on - strandat 766.263 kb on - strandat 766.282 kb on + strand, within Dsui_0765at 766.285 kb on - strand, within Dsui_0765at 766.335 kb on - strand, within Dsui_0765at 766.346 kb on + strand, within Dsui_0765at 766.369 kb on - strandat 766.369 kb on - strand, within Dsui_0765at 766.389 kb on - strand, within Dsui_0765at 766.416 kb on + strand, within Dsui_0765at 766.426 kb on - strand, within Dsui_0765at 766.426 kb on - strand, within Dsui_0765at 766.431 kb on - strand, within Dsui_0765at 766.452 kb on + strand, within Dsui_0765at 766.455 kb on - strandat 766.460 kb on - strand, within Dsui_0765at 766.498 kb on + strand, within Dsui_0765at 766.524 kb on + strand, within Dsui_0765at 766.532 kb on - strand, within Dsui_0765at 766.537 kb on + strand, within Dsui_0765at 766.544 kb on - strand, within Dsui_0765at 766.545 kb on - strand, within Dsui_0765at 766.565 kb on + strand, within Dsui_0765at 766.573 kb on + strand, within Dsui_0765at 766.575 kb on + strand, within Dsui_0765at 766.575 kb on + strand, within Dsui_0765at 766.589 kb on + strandat 766.594 kb on + strand, within Dsui_0765at 766.597 kb on - strand, within Dsui_0765at 766.740 kb on + strand, within Dsui_0765at 766.757 kb on - strand, within Dsui_0765at 766.784 kb on - strand, within Dsui_0765at 766.825 kb on - strand, within Dsui_0765at 766.841 kb on - strand, within Dsui_0765at 766.841 kb on - strand, within Dsui_0765at 766.874 kb on - strand, within Dsui_0765at 766.912 kb on + strandat 766.930 kb on - strandat 766.941 kb on - strandat 766.947 kb on + strandat 766.947 kb on + strandat 766.965 kb on - strandat 766.986 kb on + strandat 767.012 kb on + strandat 767.020 kb on - strandat 767.033 kb on - strandat 767.082 kb on + strandat 767.090 kb on - strandat 767.090 kb on - strandat 767.090 kb on - strandat 767.091 kb on - strandat 767.115 kb on - strandat 767.149 kb on + strandat 767.149 kb on + strandat 767.152 kb on - strandat 767.157 kb on - strandat 767.251 kb on - strandat 767.278 kb on + strandat 767.286 kb on - strandat 767.302 kb on + strandat 767.413 kb on + strand, within Dsui_0766at 767.445 kb on + strand, within Dsui_0766at 767.445 kb on + strand, within Dsui_0766at 767.450 kb on + strand, within Dsui_0766at 767.457 kb on + strand, within Dsui_0766at 767.481 kb on + strand, within Dsui_0766at 767.517 kb on + strandat 767.591 kb on - strandat 767.606 kb on + strandat 767.614 kb on + strandat 767.772 kb on + strandat 767.818 kb on + strandat 767.820 kb on - strandat 767.826 kb on - strandat 767.832 kb on + strandat 767.932 kb on - strandat 767.953 kb on - strandat 767.953 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM
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765,201 + Dsui_0763 0.59 +0.4
765,219 - +0.4
765,274 - Dsui_0763 0.64 -0.6
765,324 + -0.6
765,362 + +0.4
765,393 + Dsui_0763 0.72 +0.4
765,427 - Dsui_0763 0.75 +0.4
765,493 - +0.4
765,507 + +0.4
765,507 + +0.4
765,517 + Dsui_0763 0.81 -1.6
765,517 + Dsui_0763 0.81 -0.6
765,522 + Dsui_0763 0.82 +0.4
765,525 - Dsui_0763 0.82 -3.5
765,525 - Dsui_0763 0.82 -1.2
765,530 - Dsui_0763 0.82 -0.6
765,533 + Dsui_0763 0.82 -2.2
765,541 - Dsui_0763 0.83 +0.4
765,542 - +0.4
765,575 + +0.4
765,742 + -2.0
765,761 - -3.3
765,761 - +0.4
765,761 - -1.6
765,781 + -2.2
765,859 + +0.4
765,861 - +0.4
765,895 + Dsui_0764 0.30 -2.0
765,952 - Dsui_0764 0.47 -0.6
765,994 + Dsui_0764 0.59 -1.6
766,028 + Dsui_0764 0.69 +0.4
766,028 + Dsui_0764 0.69 -3.1
766,036 - +0.4
766,044 + Dsui_0764 0.74 +0.4
766,046 + Dsui_0764 0.75 +0.4
766,123 - -3.0
766,182 - -1.2
766,210 + +0.4
766,218 - +0.4
766,221 - -1.2
766,223 - +0.4
766,258 - -1.2
766,263 - +0.4
766,282 + Dsui_0765 0.11 -1.6
766,285 - Dsui_0765 0.12 +0.4
766,335 - Dsui_0765 0.18 -2.8
766,346 + Dsui_0765 0.20 -1.2
766,369 - +0.4
766,369 - Dsui_0765 0.23 -2.2
766,389 - Dsui_0765 0.25 -1.2
766,416 + Dsui_0765 0.28 -1.6
766,426 - Dsui_0765 0.30 -0.6
766,426 - Dsui_0765 0.30 -2.0
766,431 - Dsui_0765 0.30 -2.6
766,452 + Dsui_0765 0.33 -1.2
766,455 - +0.4
766,460 - Dsui_0765 0.34 -2.2
766,498 + Dsui_0765 0.39 -0.6
766,524 + Dsui_0765 0.42 +0.4
766,532 - Dsui_0765 0.43 -0.6
766,537 + Dsui_0765 0.44 +0.4
766,544 - Dsui_0765 0.45 -1.2
766,545 - Dsui_0765 0.45 -1.0
766,565 + Dsui_0765 0.47 -2.8
766,573 + Dsui_0765 0.48 -1.2
766,575 + Dsui_0765 0.49 -2.2
766,575 + Dsui_0765 0.49 -2.0
766,589 + +0.4
766,594 + Dsui_0765 0.51 -0.6
766,597 - Dsui_0765 0.52 -2.5
766,740 + Dsui_0765 0.70 +0.4
766,757 - Dsui_0765 0.72 +0.4
766,784 - Dsui_0765 0.75 -0.6
766,825 - Dsui_0765 0.81 +0.4
766,841 - Dsui_0765 0.83 -2.0
766,841 - Dsui_0765 0.83 +0.4
766,874 - Dsui_0765 0.87 -1.6
766,912 + -2.0
766,930 - -3.0
766,941 - +0.4
766,947 + -2.7
766,947 + -2.5
766,965 - -1.6
766,986 + +0.4
767,012 + +0.4
767,020 - -0.6
767,033 - -2.2
767,082 + +0.4
767,090 - +0.4
767,090 - +0.4
767,090 - -0.6
767,091 - -1.2
767,115 - -1.6
767,149 + -2.0
767,149 + +0.4
767,152 - +0.4
767,157 - +0.4
767,251 - -0.6
767,278 + -0.3
767,286 - -1.6
767,302 + -0.4
767,413 + Dsui_0766 0.50 -0.0
767,445 + Dsui_0766 0.63 -0.8
767,445 + Dsui_0766 0.63 -0.2
767,450 + Dsui_0766 0.65 -0.5
767,457 + Dsui_0766 0.68 -0.0
767,481 + Dsui_0766 0.78 -1.5
767,517 + -1.8
767,591 - +0.4
767,606 + -0.2
767,614 + +0.2
767,772 + +0.1
767,818 + -0.1
767,820 - +0.4
767,826 - +0.4
767,832 + -0.3
767,932 - -2.2
767,953 - +0.4
767,953 - +0.4

Or see this region's nucleotide sequence