Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0208 and Dsui_0209 overlap by 1 nucleotides Dsui_0209 and Dsui_0210 overlap by 1 nucleotides
Dsui_0208: Dsui_0208 - hypothetical protein, at 206,979 to 210,539
_0208
Dsui_0209: Dsui_0209 - hypothetical protein, at 210,539 to 211,630
_0209
Dsui_0210: Dsui_0210 - hypothetical protein, at 211,630 to 213,639
_0210
Position (kb)
210
211
212 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 209.624 kb on - strand, within Dsui_0208 at 209.767 kb on + strand at 209.767 kb on + strand, within Dsui_0208 at 209.767 kb on + strand, within Dsui_0208 at 209.775 kb on - strand, within Dsui_0208 at 209.775 kb on - strand, within Dsui_0208 at 209.787 kb on + strand, within Dsui_0208 at 209.847 kb on + strand, within Dsui_0208 at 209.847 kb on + strand, within Dsui_0208 at 209.855 kb on - strand, within Dsui_0208 at 209.933 kb on - strand, within Dsui_0208 at 209.981 kb on - strand, within Dsui_0208 at 210.023 kb on + strand, within Dsui_0208 at 210.030 kb on - strand, within Dsui_0208 at 210.123 kb on - strand, within Dsui_0208 at 210.138 kb on - strand, within Dsui_0208 at 210.363 kb on - strand at 210.432 kb on + strand at 210.452 kb on + strand at 210.477 kb on - strand at 210.704 kb on + strand, within Dsui_0209 at 210.832 kb on + strand, within Dsui_0209 at 210.971 kb on + strand at 211.087 kb on + strand, within Dsui_0209 at 211.258 kb on - strand, within Dsui_0209 at 211.304 kb on + strand, within Dsui_0209 at 211.462 kb on - strand, within Dsui_0209 at 211.671 kb on - strand at 211.700 kb on - strand at 211.899 kb on + strand, within Dsui_0210 at 211.907 kb on - strand, within Dsui_0210 at 211.965 kb on + strand at 211.965 kb on + strand at 211.965 kb on + strand at 211.973 kb on - strand, within Dsui_0210 at 211.973 kb on - strand, within Dsui_0210 at 211.973 kb on - strand at 211.973 kb on - strand, within Dsui_0210 at 211.988 kb on - strand at 212.154 kb on - strand at 212.205 kb on + strand, within Dsui_0210 at 212.223 kb on - strand at 212.223 kb on - strand at 212.223 kb on - strand, within Dsui_0210 at 212.328 kb on + strand, within Dsui_0210 at 212.349 kb on + strand, within Dsui_0210 at 212.398 kb on - strand at 212.509 kb on - strand, within Dsui_0210 at 212.621 kb on + strand, within Dsui_0210
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 209,624 - Dsui_0208 0.74 -0.7 209,767 + -0.7 209,767 + Dsui_0208 0.78 -1.7 209,767 + Dsui_0208 0.78 -2.3 209,775 - Dsui_0208 0.79 -3.2 209,775 - Dsui_0208 0.79 +0.3 209,787 + Dsui_0208 0.79 -3.0 209,847 + Dsui_0208 0.81 +0.3 209,847 + Dsui_0208 0.81 -0.7 209,855 - Dsui_0208 0.81 -2.0 209,933 - Dsui_0208 0.83 +0.3 209,981 - Dsui_0208 0.84 +0.3 210,023 + Dsui_0208 0.85 -0.7 210,030 - Dsui_0208 0.86 -2.3 210,123 - Dsui_0208 0.88 -1.7 210,138 - Dsui_0208 0.89 -2.5 210,363 - +0.3 210,432 + +0.3 210,452 + +0.3 210,477 - -1.7 210,704 + Dsui_0209 0.15 +0.3 210,832 + Dsui_0209 0.27 +0.3 210,971 + +0.3 211,087 + Dsui_0209 0.50 -1.7 211,258 - Dsui_0209 0.66 -2.3 211,304 + Dsui_0209 0.70 -1.7 211,462 - Dsui_0209 0.85 -2.3 211,671 - -1.3 211,700 - -0.7 211,899 + Dsui_0210 0.13 -1.3 211,907 - Dsui_0210 0.14 +0.3 211,965 + +0.3 211,965 + +0.3 211,965 + +0.3 211,973 - Dsui_0210 0.17 -1.3 211,973 - Dsui_0210 0.17 -1.7 211,973 - +0.3 211,973 - Dsui_0210 0.17 -0.7 211,988 - +0.3 212,154 - -0.7 212,205 + Dsui_0210 0.29 +0.3 212,223 - +0.3 212,223 - +0.3 212,223 - Dsui_0210 0.30 -0.7 212,328 + Dsui_0210 0.35 -1.3 212,349 + Dsui_0210 0.36 -3.4 212,398 - +0.3 212,509 - Dsui_0210 0.44 +0.3 212,621 + Dsui_0210 0.49 -0.8
Or see this region's nucleotide sequence