Experiment: ALP with perchlorate 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0204 and Dsui_0205 overlap by 4 nucleotides Dsui_0205 and Dsui_0206 overlap by 4 nucleotides Dsui_0206 and Dsui_0207 overlap by 4 nucleotides Dsui_0207 and Dsui_0208 overlap by 1 nucleotides
Dsui_0204: Dsui_0204 - hypothetical protein, at 202,384 to 204,846
_0204
Dsui_0205: Dsui_0205 - Conserved hypothetical protein 2217 (DUF2460), at 204,843 to 205,451
_0205
Dsui_0206: Dsui_0206 - phage conserved hypothetical protein, at 205,448 to 206,554
_0206
Dsui_0207: Dsui_0207 - hypothetical protein, at 206,551 to 206,979
_0207
Dsui_0208: Dsui_0208 - hypothetical protein, at 206,979 to 210,539
_0208
Position (kb)
205
206
207 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 204.516 kb on + strand, within Dsui_0204 at 204.555 kb on + strand, within Dsui_0204 at 204.555 kb on + strand, within Dsui_0204 at 204.563 kb on - strand, within Dsui_0204 at 204.756 kb on - strand at 204.827 kb on + strand at 204.853 kb on + strand at 204.877 kb on - strand at 204.992 kb on + strand, within Dsui_0205 at 205.013 kb on - strand, within Dsui_0205 at 205.037 kb on + strand, within Dsui_0205 at 205.103 kb on + strand, within Dsui_0205 at 205.112 kb on - strand, within Dsui_0205 at 205.112 kb on - strand, within Dsui_0205 at 205.144 kb on + strand, within Dsui_0205 at 205.252 kb on + strand, within Dsui_0205 at 205.259 kb on + strand at 205.406 kb on - strand at 205.538 kb on - strand at 205.546 kb on + strand at 205.554 kb on + strand at 205.644 kb on + strand, within Dsui_0206 at 205.794 kb on - strand, within Dsui_0206 at 205.891 kb on + strand, within Dsui_0206 at 205.914 kb on - strand, within Dsui_0206 at 205.953 kb on - strand, within Dsui_0206 at 205.989 kb on + strand, within Dsui_0206 at 206.066 kb on - strand, within Dsui_0206 at 206.246 kb on - strand, within Dsui_0206 at 206.291 kb on + strand, within Dsui_0206 at 206.403 kb on + strand, within Dsui_0206 at 206.403 kb on + strand, within Dsui_0206 at 206.411 kb on - strand, within Dsui_0206 at 206.595 kb on - strand, within Dsui_0207 at 206.628 kb on + strand, within Dsui_0207 at 206.777 kb on + strand, within Dsui_0207 at 207.020 kb on + strand at 207.232 kb on + strand at 207.340 kb on + strand, within Dsui_0208 at 207.390 kb on + strand, within Dsui_0208 at 207.398 kb on - strand, within Dsui_0208 at 207.398 kb on - strand, within Dsui_0208 at 207.408 kb on - strand, within Dsui_0208 at 207.430 kb on + strand at 207.430 kb on + strand, within Dsui_0208 at 207.430 kb on + strand, within Dsui_0208 at 207.430 kb on + strand, within Dsui_0208 at 207.527 kb on - strand, within Dsui_0208
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 6 mM remove 204,516 + Dsui_0204 0.87 -2.0 204,555 + Dsui_0204 0.88 +0.3 204,555 + Dsui_0204 0.88 -0.7 204,563 - Dsui_0204 0.88 +0.3 204,756 - -2.3 204,827 + +0.3 204,853 + +0.3 204,877 - -0.7 204,992 + Dsui_0205 0.24 -0.7 205,013 - Dsui_0205 0.28 +0.3 205,037 + Dsui_0205 0.32 +0.3 205,103 + Dsui_0205 0.43 +0.3 205,112 - Dsui_0205 0.44 -2.0 205,112 - Dsui_0205 0.44 -2.0 205,144 + Dsui_0205 0.49 +0.3 205,252 + Dsui_0205 0.67 -0.7 205,259 + +0.3 205,406 - -3.0 205,538 - +0.3 205,546 + +0.3 205,554 + -0.7 205,644 + Dsui_0206 0.18 +0.3 205,794 - Dsui_0206 0.31 -1.7 205,891 + Dsui_0206 0.40 +0.3 205,914 - Dsui_0206 0.42 +0.3 205,953 - Dsui_0206 0.46 +0.3 205,989 + Dsui_0206 0.49 -1.3 206,066 - Dsui_0206 0.56 -1.7 206,246 - Dsui_0206 0.72 +0.3 206,291 + Dsui_0206 0.76 +0.3 206,403 + Dsui_0206 0.86 -0.7 206,403 + Dsui_0206 0.86 -2.0 206,411 - Dsui_0206 0.87 -0.7 206,595 - Dsui_0207 0.10 +0.3 206,628 + Dsui_0207 0.18 +0.3 206,777 + Dsui_0207 0.53 +0.3 207,020 + +0.3 207,232 + -0.7 207,340 + Dsui_0208 0.10 +0.3 207,390 + Dsui_0208 0.12 -1.3 207,398 - Dsui_0208 0.12 +0.3 207,398 - Dsui_0208 0.12 +0.3 207,408 - Dsui_0208 0.12 +0.3 207,430 + +0.3 207,430 + Dsui_0208 0.13 -0.7 207,430 + Dsui_0208 0.13 -0.7 207,430 + Dsui_0208 0.13 +0.3 207,527 - Dsui_0208 0.15 +0.3
Or see this region's nucleotide sequence