Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10495

Experiment: N-Acetyl-D-glucosamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10490 and BWI76_RS10495 are separated by 125 nucleotidesBWI76_RS10495 and BWI76_RS10500 are separated by 174 nucleotides BWI76_RS10490: BWI76_RS10490 - vanillate O-demethylase oxygenase subunit, at 2,216,391 to 2,217,428 _RS10490 BWI76_RS10495: BWI76_RS10495 - LysR family transcriptional regulator, at 2,217,554 to 2,218,492 _RS10495 BWI76_RS10500: BWI76_RS10500 - flavoprotein monooxygenase, at 2,218,667 to 2,219,821 _RS10500 Position (kb) 2217 2218 2219Strain fitness (log2 ratio) -1 0 1at 2216.560 kb on - strand, within BWI76_RS10490at 2216.841 kb on - strand, within BWI76_RS10490at 2216.881 kb on + strand, within BWI76_RS10490at 2217.254 kb on + strand, within BWI76_RS10490at 2217.431 kb on + strandat 2217.431 kb on - strandat 2217.915 kb on + strand, within BWI76_RS10495at 2218.027 kb on - strand, within BWI76_RS10495at 2218.128 kb on + strand, within BWI76_RS10495at 2218.303 kb on + strand, within BWI76_RS10495at 2218.308 kb on + strand, within BWI76_RS10495at 2218.362 kb on + strand, within BWI76_RS10495at 2218.367 kb on + strand, within BWI76_RS10495at 2218.588 kb on - strandat 2218.588 kb on - strandat 2218.700 kb on - strandat 2218.771 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N)
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2,216,560 - BWI76_RS10490 0.16 +0.1
2,216,841 - BWI76_RS10490 0.43 +0.8
2,216,881 + BWI76_RS10490 0.47 -0.6
2,217,254 + BWI76_RS10490 0.83 +0.4
2,217,431 + +0.2
2,217,431 - +0.0
2,217,915 + BWI76_RS10495 0.38 +0.7
2,218,027 - BWI76_RS10495 0.50 -1.2
2,218,128 + BWI76_RS10495 0.61 +0.2
2,218,303 + BWI76_RS10495 0.80 -0.3
2,218,308 + BWI76_RS10495 0.80 -0.7
2,218,362 + BWI76_RS10495 0.86 -1.2
2,218,367 + BWI76_RS10495 0.87 -0.7
2,218,588 - -0.2
2,218,588 - -0.1
2,218,700 - +0.1
2,218,771 - +0.2

Or see this region's nucleotide sequence