Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07920 and BWI76_RS07925 are separated by 0 nucleotides BWI76_RS07925 and BWI76_RS07930 overlap by 16 nucleotides BWI76_RS07930 and BWI76_RS07935 are separated by 103 nucleotides
BWI76_RS07920: BWI76_RS07920 - methionine aminotransferase, at 1,682,339 to 1,683,499
_RS07920
BWI76_RS07925: BWI76_RS07925 - hypothetical protein, at 1,683,500 to 1,684,129
_RS07925
BWI76_RS07930: BWI76_RS07930 - phosphoadenosine phosphosulfate reductase, at 1,684,114 to 1,685,337
_RS07930
BWI76_RS07935: BWI76_RS07935 - LysR family transcriptional regulator, at 1,685,441 to 1,686,352
_RS07935
Position (kb)
1684
1685
1686 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1683.133 kb on + strand, within BWI76_RS07920 at 1683.313 kb on + strand at 1683.400 kb on + strand at 1683.568 kb on - strand, within BWI76_RS07925 at 1683.627 kb on - strand, within BWI76_RS07925 at 1683.801 kb on + strand, within BWI76_RS07925 at 1683.814 kb on - strand, within BWI76_RS07925 at 1683.955 kb on - strand, within BWI76_RS07925 at 1683.978 kb on + strand, within BWI76_RS07925 at 1684.033 kb on + strand, within BWI76_RS07925 at 1684.065 kb on - strand, within BWI76_RS07925 at 1684.070 kb on + strand at 1684.105 kb on - strand at 1684.105 kb on - strand at 1684.131 kb on + strand at 1684.131 kb on + strand at 1684.139 kb on - strand at 1684.139 kb on - strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.200 kb on + strand at 1684.208 kb on - strand at 1684.208 kb on - strand at 1684.208 kb on - strand at 1684.210 kb on + strand at 1684.237 kb on + strand, within BWI76_RS07930 at 1684.400 kb on + strand, within BWI76_RS07930 at 1684.405 kb on + strand, within BWI76_RS07930 at 1684.405 kb on + strand, within BWI76_RS07930 at 1684.408 kb on - strand, within BWI76_RS07930 at 1684.439 kb on + strand, within BWI76_RS07930 at 1684.442 kb on - strand, within BWI76_RS07930 at 1684.447 kb on - strand, within BWI76_RS07930 at 1684.460 kb on + strand, within BWI76_RS07930 at 1684.492 kb on - strand, within BWI76_RS07930 at 1684.492 kb on - strand, within BWI76_RS07930 at 1684.576 kb on + strand, within BWI76_RS07930 at 1684.581 kb on + strand, within BWI76_RS07930 at 1684.656 kb on + strand, within BWI76_RS07930 at 1684.664 kb on - strand, within BWI76_RS07930 at 1684.726 kb on + strand, within BWI76_RS07930 at 1684.749 kb on + strand, within BWI76_RS07930 at 1684.757 kb on - strand, within BWI76_RS07930 at 1684.848 kb on - strand, within BWI76_RS07930 at 1684.912 kb on + strand, within BWI76_RS07930 at 1684.920 kb on - strand, within BWI76_RS07930 at 1684.949 kb on - strand, within BWI76_RS07930 at 1685.003 kb on - strand, within BWI76_RS07930 at 1685.003 kb on - strand, within BWI76_RS07930 at 1685.015 kb on + strand, within BWI76_RS07930 at 1685.020 kb on + strand at 1685.045 kb on + strand, within BWI76_RS07930 at 1685.050 kb on + strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.058 kb on - strand, within BWI76_RS07930 at 1685.063 kb on + strand, within BWI76_RS07930 at 1685.094 kb on - strand, within BWI76_RS07930 at 1685.111 kb on - strand, within BWI76_RS07930 at 1685.115 kb on + strand, within BWI76_RS07930 at 1685.115 kb on + strand, within BWI76_RS07930 at 1685.139 kb on - strand, within BWI76_RS07930 at 1685.175 kb on - strand, within BWI76_RS07930 at 1685.196 kb on - strand, within BWI76_RS07930 at 1685.206 kb on + strand, within BWI76_RS07930 at 1685.214 kb on - strand, within BWI76_RS07930 at 1685.214 kb on - strand, within BWI76_RS07930 at 1685.274 kb on + strand at 1685.274 kb on + strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.282 kb on - strand at 1685.309 kb on - strand at 1685.619 kb on - strand, within BWI76_RS07935 at 1685.619 kb on - strand, within BWI76_RS07935 at 1685.652 kb on - strand, within BWI76_RS07935 at 1685.658 kb on + strand, within BWI76_RS07935 at 1685.768 kb on + strand, within BWI76_RS07935 at 1685.772 kb on + strand, within BWI76_RS07935 at 1685.772 kb on + strand, within BWI76_RS07935 at 1685.780 kb on - strand, within BWI76_RS07935 at 1685.781 kb on - strand, within BWI76_RS07935 at 1685.785 kb on - strand, within BWI76_RS07935 at 1685.795 kb on - strand, within BWI76_RS07935 at 1685.802 kb on + strand, within BWI76_RS07935 at 1685.804 kb on - strand, within BWI76_RS07935 at 1685.891 kb on + strand, within BWI76_RS07935 at 1685.907 kb on + strand, within BWI76_RS07935 at 1685.915 kb on - strand, within BWI76_RS07935 at 1685.915 kb on - strand, within BWI76_RS07935 at 1685.915 kb on - strand, within BWI76_RS07935 at 1685.927 kb on + strand, within BWI76_RS07935 at 1685.935 kb on - strand at 1685.939 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.941 kb on + strand, within BWI76_RS07935 at 1685.943 kb on + strand, within BWI76_RS07935 at 1685.949 kb on - strand, within BWI76_RS07935 at 1685.949 kb on - strand, within BWI76_RS07935 at 1685.949 kb on - strand at 1685.970 kb on + strand, within BWI76_RS07935 at 1685.977 kb on + strand, within BWI76_RS07935 at 1685.986 kb on - strand, within BWI76_RS07935 at 1685.997 kb on + strand at 1686.042 kb on + strand, within BWI76_RS07935 at 1686.049 kb on - strand, within BWI76_RS07935 at 1686.136 kb on + strand, within BWI76_RS07935 at 1686.136 kb on + strand, within BWI76_RS07935 at 1686.136 kb on + strand at 1686.144 kb on - strand, within BWI76_RS07935 at 1686.160 kb on - strand, within BWI76_RS07935 at 1686.172 kb on - strand, within BWI76_RS07935 at 1686.200 kb on - strand, within BWI76_RS07935 at 1686.209 kb on - strand, within BWI76_RS07935 at 1686.220 kb on - strand, within BWI76_RS07935 at 1686.277 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 1,683,133 + BWI76_RS07920 0.68 +0.3 1,683,313 + +0.3 1,683,400 + -0.0 1,683,568 - BWI76_RS07925 0.11 -0.0 1,683,627 - BWI76_RS07925 0.20 +0.9 1,683,801 + BWI76_RS07925 0.48 +0.9 1,683,814 - BWI76_RS07925 0.50 +0.6 1,683,955 - BWI76_RS07925 0.72 +1.3 1,683,978 + BWI76_RS07925 0.76 -0.7 1,684,033 + BWI76_RS07925 0.85 +0.1 1,684,065 - BWI76_RS07925 0.90 +0.1 1,684,070 + -3.6 1,684,105 - -1.9 1,684,105 - -0.0 1,684,131 + +0.4 1,684,131 + +0.7 1,684,139 - +0.0 1,684,139 - -0.5 1,684,200 + -1.0 1,684,200 + +0.4 1,684,200 + -1.0 1,684,200 + -0.3 1,684,200 + -0.9 1,684,208 - +0.3 1,684,208 - +0.3 1,684,208 - -0.6 1,684,210 + +0.8 1,684,237 + BWI76_RS07930 0.10 -0.1 1,684,400 + BWI76_RS07930 0.23 -0.5 1,684,405 + BWI76_RS07930 0.24 -0.9 1,684,405 + BWI76_RS07930 0.24 +0.5 1,684,408 - BWI76_RS07930 0.24 -0.3 1,684,439 + BWI76_RS07930 0.27 -0.2 1,684,442 - BWI76_RS07930 0.27 +0.4 1,684,447 - BWI76_RS07930 0.27 +0.1 1,684,460 + BWI76_RS07930 0.28 +0.8 1,684,492 - BWI76_RS07930 0.31 +0.9 1,684,492 - BWI76_RS07930 0.31 +0.2 1,684,576 + BWI76_RS07930 0.38 +0.1 1,684,581 + BWI76_RS07930 0.38 +0.2 1,684,656 + BWI76_RS07930 0.44 +0.4 1,684,664 - BWI76_RS07930 0.45 -0.5 1,684,726 + BWI76_RS07930 0.50 +0.4 1,684,749 + BWI76_RS07930 0.52 +1.5 1,684,757 - BWI76_RS07930 0.53 +0.4 1,684,848 - BWI76_RS07930 0.60 +1.0 1,684,912 + BWI76_RS07930 0.65 +0.3 1,684,920 - BWI76_RS07930 0.66 +0.9 1,684,949 - BWI76_RS07930 0.68 -1.4 1,685,003 - BWI76_RS07930 0.73 +0.5 1,685,003 - BWI76_RS07930 0.73 -0.1 1,685,015 + BWI76_RS07930 0.74 -2.2 1,685,020 + -0.2 1,685,045 + BWI76_RS07930 0.76 -0.7 1,685,050 + BWI76_RS07930 0.76 +1.1 1,685,058 - BWI76_RS07930 0.77 +3.7 1,685,058 - BWI76_RS07930 0.77 -0.6 1,685,058 - BWI76_RS07930 0.77 -2.2 1,685,058 - BWI76_RS07930 0.77 -1.2 1,685,063 + BWI76_RS07930 0.78 -1.4 1,685,094 - BWI76_RS07930 0.80 -0.1 1,685,111 - BWI76_RS07930 0.81 +0.0 1,685,115 + BWI76_RS07930 0.82 +0.3 1,685,115 + BWI76_RS07930 0.82 +1.8 1,685,139 - BWI76_RS07930 0.84 -0.2 1,685,175 - BWI76_RS07930 0.87 -0.2 1,685,196 - BWI76_RS07930 0.88 -0.5 1,685,206 + BWI76_RS07930 0.89 -1.9 1,685,214 - BWI76_RS07930 0.90 -0.1 1,685,214 - BWI76_RS07930 0.90 -0.4 1,685,274 + +0.3 1,685,274 + -2.2 1,685,282 - +0.1 1,685,282 - +0.4 1,685,282 - +1.1 1,685,282 - +0.1 1,685,282 - -0.1 1,685,282 - +1.5 1,685,282 - +0.1 1,685,282 - -1.8 1,685,309 - -0.0 1,685,619 - BWI76_RS07935 0.20 -0.7 1,685,619 - BWI76_RS07935 0.20 -0.1 1,685,652 - BWI76_RS07935 0.23 +0.1 1,685,658 + BWI76_RS07935 0.24 +0.1 1,685,768 + BWI76_RS07935 0.36 -2.6 1,685,772 + BWI76_RS07935 0.36 +0.3 1,685,772 + BWI76_RS07935 0.36 -0.1 1,685,780 - BWI76_RS07935 0.37 +0.4 1,685,781 - BWI76_RS07935 0.37 +0.7 1,685,785 - BWI76_RS07935 0.38 -0.9 1,685,795 - BWI76_RS07935 0.39 -3.7 1,685,802 + BWI76_RS07935 0.40 -1.8 1,685,804 - BWI76_RS07935 0.40 -0.4 1,685,891 + BWI76_RS07935 0.49 -0.3 1,685,907 + BWI76_RS07935 0.51 -0.5 1,685,915 - BWI76_RS07935 0.52 +0.4 1,685,915 - BWI76_RS07935 0.52 -1.8 1,685,915 - BWI76_RS07935 0.52 -0.7 1,685,927 + BWI76_RS07935 0.53 -1.0 1,685,935 - +2.1 1,685,939 + BWI76_RS07935 0.55 -0.0 1,685,941 + BWI76_RS07935 0.55 +1.1 1,685,941 + BWI76_RS07935 0.55 +0.7 1,685,941 + BWI76_RS07935 0.55 -0.7 1,685,941 + BWI76_RS07935 0.55 -0.5 1,685,941 + BWI76_RS07935 0.55 -1.9 1,685,941 + BWI76_RS07935 0.55 +0.9 1,685,941 + BWI76_RS07935 0.55 -0.0 1,685,941 + BWI76_RS07935 0.55 -1.6 1,685,943 + BWI76_RS07935 0.55 +0.7 1,685,949 - BWI76_RS07935 0.56 -1.5 1,685,949 - BWI76_RS07935 0.56 -0.9 1,685,949 - -0.3 1,685,970 + BWI76_RS07935 0.58 -0.9 1,685,977 + BWI76_RS07935 0.59 +0.8 1,685,986 - BWI76_RS07935 0.60 -2.1 1,685,997 + +2.1 1,686,042 + BWI76_RS07935 0.66 +0.8 1,686,049 - BWI76_RS07935 0.67 +0.6 1,686,136 + BWI76_RS07935 0.76 -0.5 1,686,136 + BWI76_RS07935 0.76 +2.1 1,686,136 + +3.7 1,686,144 - BWI76_RS07935 0.77 -1.5 1,686,160 - BWI76_RS07935 0.79 -1.3 1,686,172 - BWI76_RS07935 0.80 +0.7 1,686,200 - BWI76_RS07935 0.83 +0.5 1,686,209 - BWI76_RS07935 0.84 -0.7 1,686,220 - BWI76_RS07935 0.85 -2.1 1,686,277 - -2.1
Or see this region's nucleotide sequence