Experiment: N-Acetyl-D-glucosamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05180 and BWI76_RS05185 are separated by 191 nucleotides BWI76_RS05185 and BWI76_RS05190 are separated by 46 nucleotides BWI76_RS05190 and BWI76_RS05195 are separated by 107 nucleotides
BWI76_RS05180: BWI76_RS05180 - serine endoprotease DegQ, at 1,089,597 to 1,091,036
_RS05180
BWI76_RS05185: BWI76_RS05185 - CdaR family transcriptional regulator, at 1,091,228 to 1,092,385
_RS05185
BWI76_RS05190: BWI76_RS05190 - hypothetical protein, at 1,092,432 to 1,092,821
_RS05190
BWI76_RS05195: BWI76_RS05195 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,092,929 to 1,093,753
_RS05195
Position (kb)
1091
1092
1093 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1090.247 kb on - strand, within BWI76_RS05180 at 1090.247 kb on - strand, within BWI76_RS05180 at 1090.331 kb on + strand, within BWI76_RS05180 at 1090.338 kb on - strand, within BWI76_RS05180 at 1090.606 kb on - strand, within BWI76_RS05180 at 1090.800 kb on + strand, within BWI76_RS05180 at 1090.806 kb on - strand, within BWI76_RS05180 at 1090.942 kb on + strand at 1091.147 kb on - strand at 1091.200 kb on + strand at 1091.263 kb on + strand at 1091.271 kb on - strand at 1091.457 kb on + strand, within BWI76_RS05185 at 1091.548 kb on + strand, within BWI76_RS05185 at 1091.616 kb on - strand, within BWI76_RS05185 at 1091.627 kb on + strand, within BWI76_RS05185 at 1091.662 kb on - strand, within BWI76_RS05185 at 1091.803 kb on + strand, within BWI76_RS05185 at 1091.806 kb on - strand, within BWI76_RS05185 at 1091.806 kb on - strand, within BWI76_RS05185 at 1092.204 kb on + strand, within BWI76_RS05185 at 1092.268 kb on + strand, within BWI76_RS05185 at 1092.308 kb on - strand at 1092.344 kb on + strand at 1092.354 kb on + strand at 1092.357 kb on - strand at 1092.357 kb on - strand at 1092.374 kb on - strand at 1092.599 kb on - strand, within BWI76_RS05190 at 1092.599 kb on - strand, within BWI76_RS05190 at 1092.604 kb on - strand, within BWI76_RS05190 at 1092.627 kb on + strand, within BWI76_RS05190 at 1092.627 kb on + strand, within BWI76_RS05190 at 1092.627 kb on + strand, within BWI76_RS05190 at 1092.627 kb on - strand at 1092.635 kb on - strand, within BWI76_RS05190 at 1092.635 kb on - strand, within BWI76_RS05190 at 1092.635 kb on - strand, within BWI76_RS05190 at 1092.706 kb on + strand, within BWI76_RS05190 at 1092.706 kb on + strand, within BWI76_RS05190 at 1092.714 kb on - strand, within BWI76_RS05190 at 1092.755 kb on + strand, within BWI76_RS05190 at 1092.784 kb on + strand at 1092.789 kb on + strand at 1092.794 kb on + strand at 1092.802 kb on - strand at 1092.818 kb on + strand at 1092.837 kb on - strand at 1092.927 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction N-Acetyl-D-glucosamine (N) remove 1,090,247 - BWI76_RS05180 0.45 -1.1 1,090,247 - BWI76_RS05180 0.45 -1.0 1,090,331 + BWI76_RS05180 0.51 -3.3 1,090,338 - BWI76_RS05180 0.51 +0.3 1,090,606 - BWI76_RS05180 0.70 +0.3 1,090,800 + BWI76_RS05180 0.84 +0.0 1,090,806 - BWI76_RS05180 0.84 -0.7 1,090,942 + +1.0 1,091,147 - -0.1 1,091,200 + -0.0 1,091,263 + -0.0 1,091,271 - +0.3 1,091,457 + BWI76_RS05185 0.20 +1.9 1,091,548 + BWI76_RS05185 0.28 +0.3 1,091,616 - BWI76_RS05185 0.34 +0.7 1,091,627 + BWI76_RS05185 0.34 +0.4 1,091,662 - BWI76_RS05185 0.37 +0.4 1,091,803 + BWI76_RS05185 0.50 +0.2 1,091,806 - BWI76_RS05185 0.50 +0.3 1,091,806 - BWI76_RS05185 0.50 +1.6 1,092,204 + BWI76_RS05185 0.84 +2.2 1,092,268 + BWI76_RS05185 0.90 +0.0 1,092,308 - +0.2 1,092,344 + -1.0 1,092,354 + +0.3 1,092,357 - +0.6 1,092,357 - -0.1 1,092,374 - -0.2 1,092,599 - BWI76_RS05190 0.43 +0.2 1,092,599 - BWI76_RS05190 0.43 +0.3 1,092,604 - BWI76_RS05190 0.44 -0.6 1,092,627 + BWI76_RS05190 0.50 -1.0 1,092,627 + BWI76_RS05190 0.50 -2.1 1,092,627 + BWI76_RS05190 0.50 -0.2 1,092,627 - -0.3 1,092,635 - BWI76_RS05190 0.52 -0.4 1,092,635 - BWI76_RS05190 0.52 -1.5 1,092,635 - BWI76_RS05190 0.52 +0.3 1,092,706 + BWI76_RS05190 0.70 -1.2 1,092,706 + BWI76_RS05190 0.70 +0.4 1,092,714 - BWI76_RS05190 0.72 +0.1 1,092,755 + BWI76_RS05190 0.83 +0.7 1,092,784 + -0.9 1,092,789 + +0.0 1,092,794 + +0.1 1,092,802 - +0.2 1,092,818 + -0.3 1,092,837 - -0.6 1,092,927 + -0.1
Or see this region's nucleotide sequence