Experiment: L-Methionine as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0694 and DvMF_0695 are separated by 177 nucleotides DvMF_0695 and DvMF_0696 are separated by 20 nucleotides
DvMF_0694: DvMF_0694 - protein of unknown function DUF1555 (RefSeq), at 841,599 to 842,453
_0694
DvMF_0695: DvMF_0695 - CAAX prenyl protease-related protein (RefSeq), at 842,631 to 843,341
_0695
DvMF_0696: DvMF_0696 - secretion protein HlyD family protein (RefSeq), at 843,362 to 844,423
_0696
Position (kb) 842
843
844 Strain fitness (log2 ratio) -1
0
1
2 at 841.763 kb on + strand, within DvMF_0694 at 842.196 kb on + strand, within DvMF_0694 at 842.275 kb on + strand, within DvMF_0694 at 842.432 kb on - strand at 842.448 kb on + strand at 842.711 kb on + strand, within DvMF_0695 at 842.750 kb on - strand, within DvMF_0695 at 842.786 kb on + strand, within DvMF_0695 at 842.849 kb on - strand, within DvMF_0695 at 843.005 kb on - strand, within DvMF_0695 at 843.188 kb on - strand, within DvMF_0695 at 843.486 kb on - strand, within DvMF_0696 at 843.749 kb on + strand, within DvMF_0696 at 843.767 kb on - strand, within DvMF_0696 at 843.769 kb on + strand, within DvMF_0696 at 843.769 kb on + strand, within DvMF_0696 at 843.919 kb on + strand, within DvMF_0696 at 843.945 kb on - strand, within DvMF_0696 at 844.237 kb on - strand, within DvMF_0696 at 844.248 kb on - strand, within DvMF_0696 at 844.254 kb on + strand, within DvMF_0696 at 844.262 kb on - strand, within DvMF_0696 at 844.327 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine as nutrient remove 841,763 + DvMF_0694 0.19 +0.5 842,196 + DvMF_0694 0.70 -1.1 842,275 + DvMF_0694 0.79 +0.2 842,432 - +0.3 842,448 + +0.3 842,711 + DvMF_0695 0.11 +0.1 842,750 - DvMF_0695 0.17 +1.3 842,786 + DvMF_0695 0.22 -0.1 842,849 - DvMF_0695 0.31 -0.1 843,005 - DvMF_0695 0.53 +1.1 843,188 - DvMF_0695 0.78 +0.4 843,486 - DvMF_0696 0.12 +1.3 843,749 + DvMF_0696 0.36 +0.4 843,767 - DvMF_0696 0.38 +0.8 843,769 + DvMF_0696 0.38 +1.8 843,769 + DvMF_0696 0.38 +0.7 843,919 + DvMF_0696 0.52 +1.1 843,945 - DvMF_0696 0.55 +0.3 844,237 - DvMF_0696 0.82 +0.9 844,248 - DvMF_0696 0.83 +0.6 844,254 + DvMF_0696 0.84 +1.0 844,262 - DvMF_0696 0.85 +0.0 844,327 + +0.1
Or see this region's nucleotide sequence