Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3341

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
3,506,639	-				+0.9
3,506,641	+				-0.1
3,506,734	-		Dshi_3340	0.16	+1.0
3,506,734	-		Dshi_3340	0.16	+2.2
3,506,744	-		Dshi_3340	0.18	-0.0
3,506,791	-		Dshi_3340	0.25	+0.1
3,507,001	+		Dshi_3340	0.59	+1.0
3,507,131	+		Dshi_3340	0.80	-1.1
3,507,233	-				-0.4
3,507,374	-				-0.0
3,507,385	-				-0.2
3,507,569	+				-0.1
3,507,577	-				-1.0
3,507,577	-				+0.2
3,507,622	-				-0.2
3,507,649	+				+0.8
3,507,658	+				+1.0
3,507,667	-				-0.4
3,507,774	+		Dshi_3341	0.12	+0.6
3,507,774	+		Dshi_3341	0.12	+0.5
3,507,784	+		Dshi_3341	0.13	-0.6
3,507,792	-		Dshi_3341	0.14	+0.1
3,507,792	-		Dshi_3341	0.14	-1.3
3,507,792	-		Dshi_3341	0.14	+0.2
3,507,805	+		Dshi_3341	0.14	-0.5
3,507,813	-		Dshi_3341	0.15	+1.5
3,507,858	+		Dshi_3341	0.18	-0.5
3,507,890	-		Dshi_3341	0.20	+0.0
3,507,977	+		Dshi_3341	0.27	-1.0
3,507,979	+		Dshi_3341	0.27	-0.4
3,507,985	-		Dshi_3341	0.27	+1.2
3,508,247	-		Dshi_3341	0.46	+0.6
3,508,247	-		Dshi_3341	0.46	-0.3
3,508,316	+		Dshi_3341	0.51	+0.2
3,508,444	+		Dshi_3341	0.60	+1.0
3,508,444	+		Dshi_3341	0.60	+0.1
3,508,483	-		Dshi_3341	0.62	-0.5
3,508,563	+		Dshi_3341	0.68	+0.8
3,508,633	+		Dshi_3341	0.73	+1.8
3,508,643	+		Dshi_3341	0.74	+0.2
3,508,709	-		Dshi_3341	0.78	-0.4
3,508,802	-		Dshi_3341	0.85	-1.3
3,508,919	+				-0.5
3,508,962	-				+0.4
3,508,974	+				+0.6
3,509,095	+				-0.1
3,509,095	+				-0.5
3,509,204	-		Dshi_3342	0.34	+0.5
3,509,269	-		Dshi_3342	0.49	+0.1
3,509,363	-		Dshi_3342	0.71	+1.2
3,509,444	+				+3.2
3,509,444	+				-0.3
3,509,452	-				-1.1
3,509,452	-				+1.2
3,509,452	-				+0.1
3,509,466	+				-0.2
3,509,507	+				-0.4
3,509,571	-				-0.5
3,509,823	-		Dshi_3343	0.28	+0.6
3,509,847	-		Dshi_3343	0.30	-0.7
3,509,848	-		Dshi_3343	0.30	-0.3
3,509,918	-		Dshi_3343	0.35	-0.3
3,509,929	+		Dshi_3343	0.36	-0.8