Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3264

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
3,428,476	+		Dshi_3262	0.25	-1.0
3,428,582	+		Dshi_3262	0.53	-0.1
3,428,582	-		Dshi_3262	0.53	-0.7
3,428,588	+		Dshi_3262	0.55	-1.4
3,428,596	-		Dshi_3262	0.57	+0.3
3,428,613	-		Dshi_3262	0.61	+1.5
3,428,666	+		Dshi_3262	0.75	+0.9
3,428,674	-		Dshi_3262	0.77	-0.4
3,428,694	+		Dshi_3262	0.82	+0.6
3,428,697	+		Dshi_3262	0.83	+0.7
3,428,699	+		Dshi_3262	0.84	-1.1
3,428,699	+		Dshi_3262	0.84	-0.5
3,428,724	+				-1.6
3,428,762	-				-0.6
3,428,775	-				+0.1
3,428,775	-				+1.1
3,428,798	+				-0.0
3,428,848	+		Dshi_3263	0.16	+0.8
3,428,871	+		Dshi_3263	0.20	-0.4
3,428,892	+		Dshi_3263	0.25	+1.6
3,428,892	+		Dshi_3263	0.25	-0.4
3,428,900	-		Dshi_3263	0.26	-1.0
3,428,900	-		Dshi_3263	0.26	-0.8
3,428,913	+		Dshi_3263	0.29	+0.9
3,429,027	-		Dshi_3263	0.51	-0.1
3,429,067	+		Dshi_3263	0.59	-0.1
3,429,094	-		Dshi_3263	0.65	+0.5
3,429,302	-				-0.7
3,429,343	+				-0.6
3,429,343	+				-0.1
3,429,343	+				+0.4
3,429,343	+				+0.4
3,429,351	-				-0.7
3,429,393	+				-0.3
3,429,403	-				-1.1
3,429,418	+				-0.5
3,429,418	+				-0.8
3,429,418	+				-0.4
3,429,418	+				-1.2
3,429,418	+				-0.6
3,429,426	-				-0.2
3,429,426	-				-1.6
3,429,426	-				+0.3
3,429,477	+				-0.5
3,429,483	+				+0.8
3,429,485	-				+0.3
3,429,485	-				-0.8
3,429,510	+				-0.9
3,429,521	+				-0.3
3,429,534	-				-0.7
3,429,568	+		Dshi_3264	0.11	-0.9
3,429,568	+		Dshi_3264	0.11	-1.4
3,429,568	+		Dshi_3264	0.11	-0.4
3,429,568	+		Dshi_3264	0.11	-0.4
3,429,569	+		Dshi_3264	0.11	-0.1
3,429,576	-		Dshi_3264	0.11	-1.1
3,429,576	-		Dshi_3264	0.11	-0.3
3,429,578	+		Dshi_3264	0.12	+0.1
3,429,611	+		Dshi_3264	0.14	+1.0
3,429,630	+		Dshi_3264	0.15	-0.9
3,429,690	+		Dshi_3264	0.18	-0.2
3,429,721	-		Dshi_3264	0.20	-0.5
3,429,807	-		Dshi_3264	0.25	-0.6
3,429,819	-		Dshi_3264	0.26	-1.0
3,429,858	-		Dshi_3264	0.28	+0.3
3,429,882	+		Dshi_3264	0.30	-0.8
3,429,945	-		Dshi_3264	0.33	+0.3
3,429,980	-		Dshi_3264	0.36	-2.3
3,430,032	+		Dshi_3264	0.39	-1.3
3,430,062	-		Dshi_3264	0.40	+0.7
3,430,077	-		Dshi_3264	0.41	+0.9
3,430,200	-		Dshi_3264	0.49	-0.3
3,430,208	-		Dshi_3264	0.49	-0.2
3,430,218	-		Dshi_3264	0.50	-0.7
3,430,339	+		Dshi_3264	0.57	-1.2
3,430,354	+		Dshi_3264	0.58	-0.5
3,430,361	-		Dshi_3264	0.58	-0.1
3,430,471	+		Dshi_3264	0.65	-1.1
3,430,483	+		Dshi_3264	0.66	-1.2
3,430,507	+		Dshi_3264	0.67	-1.4
3,430,515	-		Dshi_3264	0.67	-0.4
3,430,583	+		Dshi_3264	0.71	-0.9
3,430,591	+		Dshi_3264	0.72	-0.5
3,430,611	-		Dshi_3264	0.73	-0.2
3,430,653	-		Dshi_3264	0.76	-0.7
3,430,677	+		Dshi_3264	0.77	-1.3
3,430,701	-		Dshi_3264	0.79	-0.4
3,430,729	-		Dshi_3264	0.80	-1.1
3,430,766	-		Dshi_3264	0.82	-0.8
3,430,873	+		Dshi_3264	0.89	-0.2
3,430,873	+		Dshi_3264	0.89	-0.4
3,430,880	+		Dshi_3264	0.89	-0.2
3,430,880	+		Dshi_3264	0.89	-0.4
3,430,895	+				-0.7
3,430,967	+				-0.2
3,431,049	+				-1.9
3,431,049	+				-0.8
3,431,136	+		Dshi_3265	0.13	-0.4
3,431,192	+		Dshi_3265	0.22	+0.3
3,431,232	+		Dshi_3265	0.28	-0.6
3,431,240	-		Dshi_3265	0.30	-0.9
3,431,240	-		Dshi_3265	0.30	-0.4
3,431,338	+		Dshi_3265	0.46	-0.8
3,431,338	+		Dshi_3265	0.46	+0.4
3,431,393	-		Dshi_3265	0.55	-0.5
3,431,407	-		Dshi_3265	0.57	-0.0
3,431,425	-		Dshi_3265	0.60	-0.9
3,431,441	-		Dshi_3265	0.63	-0.1
3,431,540	+		Dshi_3265	0.79	+0.0
3,431,581	-		Dshi_3265	0.86	-0.8
3,431,710	+		Dshi_3266	0.19	-0.3
3,431,710	+		Dshi_3266	0.19	-0.4
3,431,718	-		Dshi_3266	0.22	-0.6
3,431,746	+		Dshi_3266	0.33	-1.6
3,431,800	+		Dshi_3266	0.53	-0.6
3,431,850	-		Dshi_3266	0.71	-0.3
3,431,880	-		Dshi_3266	0.82	-1.1
3,431,930	-				+0.5
3,431,947	-				-0.4