Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2340
Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cephalothin 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,467,824 | - | Dshi_2338 | 0.51 | +0.1 | |
2,467,877 | + | Dshi_2338 | 0.55 | +0.3 | |
2,468,015 | + | Dshi_2338 | 0.67 | -0.0 | |
2,468,109 | - | Dshi_2338 | 0.75 | +0.0 | |
2,468,336 | + | +0.1 | |||
2,468,432 | - | +0.4 | |||
2,468,432 | - | -0.3 | |||
2,468,456 | + | -0.8 | |||
2,468,463 | + | -0.3 | |||
2,468,579 | - | Dshi_2339 | 0.21 | +0.4 | |
2,468,855 | - | +0.4 | |||
2,469,140 | - | Dshi_2340 | 0.11 | -1.7 | |
2,469,221 | + | Dshi_2340 | 0.13 | -1.0 | |
2,469,321 | - | Dshi_2340 | 0.16 | -0.8 | |
2,469,368 | - | Dshi_2340 | 0.18 | -1.0 | |
2,469,441 | + | Dshi_2340 | 0.20 | -1.1 | |
2,472,189 | - | -0.8 | |||
2,472,332 | - | +0.3 | |||
2,472,436 | - | +0.3 | |||
2,472,482 | + | -0.6 | |||
2,472,532 | - | -0.1 | |||
2,472,532 | - | -1.0 | |||
2,472,586 | - | +0.1 | |||
2,472,588 | - | -1.3 | |||
2,472,631 | - | Dshi_2341 | 0.10 | -1.3 | |
2,472,875 | - | Dshi_2341 | 0.20 | -0.5 |
Or see this region's nucleotide sequence