Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0832 and Dshi_0833 are separated by 464 nucleotides Dshi_0833 and Dshi_0834 are separated by 93 nucleotides
Dshi_0832: Dshi_0832 - hypothetical protein (RefSeq), at 839,877 to 840,893
_0832
Dshi_0833: Dshi_0833 - AMP-dependent synthetase and ligase (RefSeq), at 841,358 to 842,983
_0833
Dshi_0834: Dshi_0834 - protein of unknown function DUF6 transmembrane (RefSeq), at 843,077 to 843,994
_0834
Position (kb) 841
842
843 Strain fitness (log2 ratio) -2
-1
0
1
2 at 840.434 kb on + strand, within Dshi_0832 at 840.594 kb on - strand, within Dshi_0832 at 840.688 kb on - strand, within Dshi_0832 at 840.854 kb on - strand at 840.878 kb on - strand at 840.893 kb on + strand at 840.895 kb on + strand at 841.015 kb on + strand at 841.043 kb on - strand at 841.043 kb on - strand at 841.153 kb on + strand at 841.161 kb on - strand at 841.319 kb on + strand at 841.342 kb on + strand at 841.413 kb on + strand at 841.498 kb on + strand at 841.578 kb on + strand, within Dshi_0833 at 841.583 kb on + strand, within Dshi_0833 at 841.591 kb on - strand, within Dshi_0833 at 841.609 kb on - strand, within Dshi_0833 at 841.757 kb on + strand, within Dshi_0833 at 841.934 kb on - strand, within Dshi_0833 at 841.934 kb on - strand, within Dshi_0833 at 841.983 kb on + strand, within Dshi_0833 at 842.041 kb on + strand, within Dshi_0833 at 842.170 kb on - strand, within Dshi_0833 at 842.187 kb on + strand, within Dshi_0833 at 842.382 kb on + strand, within Dshi_0833 at 842.390 kb on - strand, within Dshi_0833 at 842.390 kb on - strand, within Dshi_0833 at 842.390 kb on - strand, within Dshi_0833 at 842.409 kb on + strand, within Dshi_0833 at 842.883 kb on + strand at 842.888 kb on + strand at 842.888 kb on + strand at 842.992 kb on - strand at 843.051 kb on + strand at 843.121 kb on - strand at 843.191 kb on + strand, within Dshi_0834 at 843.240 kb on - strand, within Dshi_0834 at 843.591 kb on + strand, within Dshi_0834 at 843.668 kb on + strand, within Dshi_0834 at 843.687 kb on - strand, within Dshi_0834 at 843.827 kb on + strand, within Dshi_0834
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 840,434 + Dshi_0832 0.55 +0.4 840,594 - Dshi_0832 0.71 -1.9 840,688 - Dshi_0832 0.80 -0.8 840,854 - -0.8 840,878 - -0.9 840,893 + -0.3 840,895 + +1.2 841,015 + -0.1 841,043 - -0.1 841,043 - +0.5 841,153 + +0.1 841,161 - +0.7 841,319 + +0.1 841,342 + +0.7 841,413 + -0.7 841,498 + +0.4 841,578 + Dshi_0833 0.14 +1.9 841,583 + Dshi_0833 0.14 +0.7 841,591 - Dshi_0833 0.14 -0.7 841,609 - Dshi_0833 0.15 +0.7 841,757 + Dshi_0833 0.25 +0.5 841,934 - Dshi_0833 0.35 +0.4 841,934 - Dshi_0833 0.35 +0.5 841,983 + Dshi_0833 0.38 -0.6 842,041 + Dshi_0833 0.42 +0.0 842,170 - Dshi_0833 0.50 +0.1 842,187 + Dshi_0833 0.51 -0.1 842,382 + Dshi_0833 0.63 -0.6 842,390 - Dshi_0833 0.63 +1.4 842,390 - Dshi_0833 0.63 -0.6 842,390 - Dshi_0833 0.63 +0.6 842,409 + Dshi_0833 0.65 +0.2 842,883 + +0.1 842,888 + +0.0 842,888 + +0.6 842,992 - -0.1 843,051 + -0.3 843,121 - +1.4 843,191 + Dshi_0834 0.12 +0.4 843,240 - Dshi_0834 0.18 +0.1 843,591 + Dshi_0834 0.56 -2.0 843,668 + Dshi_0834 0.64 -0.2 843,687 - Dshi_0834 0.66 -0.3 843,827 + Dshi_0834 0.82 +0.5
Or see this region's nucleotide sequence