Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0123

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
120,371	+		Dshi_0122	0.13	-0.6
120,378	+		Dshi_0122	0.14	-0.8
120,386	-		Dshi_0122	0.15	+0.5
120,389	+		Dshi_0122	0.15	+0.3
120,456	+		Dshi_0122	0.23	+0.8
120,669	-		Dshi_0122	0.45	-0.3
120,669	-		Dshi_0122	0.45	+0.4
120,705	-		Dshi_0122	0.49	-0.3
120,705	-		Dshi_0122	0.49	-0.1
120,777	+		Dshi_0122	0.57	+0.1
120,785	-		Dshi_0122	0.58	-2.6
120,815	-		Dshi_0122	0.61	-0.4
120,835	+		Dshi_0122	0.63	+0.2
120,843	+		Dshi_0122	0.64	-0.4
120,845	-		Dshi_0122	0.64	+0.7
120,851	-		Dshi_0122	0.65	+0.4
120,877	-		Dshi_0122	0.68	+1.7
120,945	-		Dshi_0122	0.75	+0.3
121,004	-		Dshi_0122	0.81	+0.0
121,062	+		Dshi_0122	0.87	-0.2
121,167	+				+0.1
121,180	-				+0.4
121,180	-				-0.2
121,187	-				+1.2
121,250	+				-0.2
121,304	+		Dshi_0123	0.13	-2.3
121,307	-		Dshi_0123	0.13	-0.4
121,325	+		Dshi_0123	0.15	-0.0
121,326	-		Dshi_0123	0.15	+0.3
121,416	-		Dshi_0123	0.25	-0.2
121,440	+		Dshi_0123	0.28	+0.3
121,487	-		Dshi_0123	0.33	-1.0
121,538	-		Dshi_0123	0.39	-1.2
121,553	-		Dshi_0123	0.40	-0.8
121,588	-		Dshi_0123	0.44	-0.9
121,655	-		Dshi_0123	0.52	-0.8
121,662	+		Dshi_0123	0.52	+0.0
121,701	+		Dshi_0123	0.57	-0.1
121,711	+		Dshi_0123	0.58	-1.4
121,716	+		Dshi_0123	0.58	-0.2
121,777	+		Dshi_0123	0.65	-0.6
121,849	-		Dshi_0123	0.73	-0.2
121,849	-		Dshi_0123	0.73	-1.4
121,856	-		Dshi_0123	0.74	-0.5
121,915	-		Dshi_0123	0.80	-0.3
121,974	+		Dshi_0123	0.87	-2.2
122,049	+				-1.2
122,058	+				+0.9
122,102	+				-0.6
122,103	+				-0.6
122,103	+				-0.2
122,109	-				+0.5
122,112	+				-1.7
122,124	+				-0.7
122,124	+				+0.2
122,124	+				-0.1
122,130	-				-0.0
122,132	-				-0.0
122,132	-				+0.2
122,132	-				+0.4
122,146	+				+0.4
122,156	+				-0.8
122,243	+				+0.7
122,248	+				-0.0
122,335	+		Dshi_0124	0.16	+0.6
122,343	-		Dshi_0124	0.18	+0.0
122,369	-		Dshi_0124	0.22	+1.2
122,392	-		Dshi_0124	0.26	-0.4
122,392	-		Dshi_0124	0.26	+0.3
122,484	+		Dshi_0124	0.42	-0.8
122,510	+		Dshi_0124	0.46	-0.4
122,562	+		Dshi_0124	0.55	-0.5
122,572	+		Dshi_0124	0.57	-0.2
122,580	-		Dshi_0124	0.58	-0.5
122,635	+		Dshi_0124	0.68	+0.0
122,721	+		Dshi_0124	0.82	+1.6
122,745	-		Dshi_0124	0.86	-0.1
122,819	-				+0.0
122,829	-				-0.7
122,856	+				+0.4
122,888	+				-0.4
122,936	-				-0.3
123,011	-				-0.4
123,013	+				-0.4
123,015	+				-0.4
123,021	-				+0.1
123,072	+		Dshi_0125	0.10	-0.2