Experiment: selenate 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6090 and Pf6N2E2_6091 overlap by 32 nucleotides Pf6N2E2_6091 and Pf6N2E2_6092 are separated by 28 nucleotides
Pf6N2E2_6090 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 6,914,004 to 6,914,996
_6090
Pf6N2E2_6091 - Epoxide hydrolase (EC 3.3.2.9), at 6,914,965 to 6,915,867
_6091
Pf6N2E2_6092 - hypothetical protein, at 6,915,896 to 6,916,273
_6092
Position (kb)
6914
6915
6916 Strain fitness (log2 ratio)
-2
-1
0
1 at 6914.003 kb on + strand at 6914.134 kb on - strand, within Pf6N2E2_6090 at 6914.259 kb on + strand, within Pf6N2E2_6090 at 6914.735 kb on + strand, within Pf6N2E2_6090 at 6914.946 kb on + strand at 6915.059 kb on + strand, within Pf6N2E2_6091 at 6915.059 kb on + strand, within Pf6N2E2_6091 at 6915.212 kb on + strand, within Pf6N2E2_6091 at 6915.212 kb on + strand, within Pf6N2E2_6091 at 6915.212 kb on + strand, within Pf6N2E2_6091 at 6915.212 kb on + strand, within Pf6N2E2_6091 at 6915.213 kb on - strand, within Pf6N2E2_6091 at 6915.213 kb on - strand, within Pf6N2E2_6091 at 6915.230 kb on + strand, within Pf6N2E2_6091 at 6915.231 kb on - strand, within Pf6N2E2_6091 at 6915.398 kb on + strand, within Pf6N2E2_6091 at 6915.398 kb on + strand, within Pf6N2E2_6091 at 6915.398 kb on + strand, within Pf6N2E2_6091 at 6915.398 kb on + strand, within Pf6N2E2_6091 at 6915.399 kb on - strand, within Pf6N2E2_6091 at 6915.399 kb on - strand, within Pf6N2E2_6091 at 6915.401 kb on + strand, within Pf6N2E2_6091 at 6915.402 kb on - strand, within Pf6N2E2_6091 at 6915.473 kb on + strand, within Pf6N2E2_6091 at 6915.918 kb on + strand at 6915.918 kb on + strand at 6915.919 kb on - strand at 6916.334 kb on + strand at 6916.335 kb on - strand at 6916.335 kb on - strand at 6916.378 kb on + strand at 6916.379 kb on - strand at 6916.379 kb on - strand at 6916.466 kb on + strand at 6916.477 kb on - strand at 6916.523 kb on + strand at 6916.523 kb on + strand at 6916.524 kb on - strand at 6916.524 kb on - strand at 6916.542 kb on + strand at 6916.573 kb on + strand at 6916.694 kb on + strand at 6916.694 kb on + strand at 6916.694 kb on + strand at 6916.733 kb on + strand at 6916.734 kb on - strand at 6916.802 kb on + strand at 6916.802 kb on + strand at 6916.803 kb on - strand at 6916.867 kb on - strand at 6916.867 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction selenate 0.5 M remove 6,914,003 + +0.3 6,914,134 - Pf6N2E2_6090 0.13 -1.8 6,914,259 + Pf6N2E2_6090 0.26 +0.9 6,914,735 + Pf6N2E2_6090 0.74 +0.4 6,914,946 + +0.7 6,915,059 + Pf6N2E2_6091 0.10 -0.5 6,915,059 + Pf6N2E2_6091 0.10 -0.3 6,915,212 + Pf6N2E2_6091 0.27 -1.5 6,915,212 + Pf6N2E2_6091 0.27 +0.4 6,915,212 + Pf6N2E2_6091 0.27 -1.7 6,915,212 + Pf6N2E2_6091 0.27 -0.6 6,915,213 - Pf6N2E2_6091 0.27 -0.1 6,915,213 - Pf6N2E2_6091 0.27 -1.2 6,915,230 + Pf6N2E2_6091 0.29 +0.5 6,915,231 - Pf6N2E2_6091 0.29 -0.9 6,915,398 + Pf6N2E2_6091 0.48 -1.6 6,915,398 + Pf6N2E2_6091 0.48 -0.1 6,915,398 + Pf6N2E2_6091 0.48 +1.1 6,915,398 + Pf6N2E2_6091 0.48 -0.5 6,915,399 - Pf6N2E2_6091 0.48 -1.9 6,915,399 - Pf6N2E2_6091 0.48 -0.1 6,915,401 + Pf6N2E2_6091 0.48 -0.9 6,915,402 - Pf6N2E2_6091 0.48 -1.1 6,915,473 + Pf6N2E2_6091 0.56 +0.1 6,915,918 + -1.6 6,915,918 + -0.7 6,915,919 - -0.2 6,916,334 + +1.2 6,916,335 - +0.4 6,916,335 - -0.9 6,916,378 + -0.7 6,916,379 - +0.2 6,916,379 - +0.5 6,916,466 + +1.3 6,916,477 - -1.9 6,916,523 + -0.2 6,916,523 + +1.3 6,916,524 - -0.8 6,916,524 - -0.2 6,916,542 + -0.3 6,916,573 + +1.2 6,916,694 + +0.3 6,916,694 + +0.1 6,916,694 + -0.3 6,916,733 + +0.4 6,916,734 - -1.7 6,916,802 + +0.7 6,916,802 + -0.1 6,916,803 - +0.1 6,916,867 - -0.0 6,916,867 - -2.4
Or see this region's nucleotide sequence