Experiment: selenate 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5242 and Pf6N2E2_5243 overlap by 9 nucleotides Pf6N2E2_5243 and Pf6N2E2_5244 are separated by 558 nucleotides Pf6N2E2_5244 and Pf6N2E2_5245 are separated by 205 nucleotides
Pf6N2E2_5242 - Malate:quinone oxidoreductase (EC 1.1.5.4), at 6,038,881 to 6,040,386
_5242
Pf6N2E2_5243 - hypothetical protein, at 6,040,378 to 6,040,566
_5243
Pf6N2E2_5244 - FIG00954931: hypothetical protein, at 6,041,125 to 6,041,358
_5244
Pf6N2E2_5245 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 6,041,564 to 6,042,148
_5245
Position (kb)
6040
6041 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 6039.777 kb on - strand, within Pf6N2E2_5242 at 6039.950 kb on + strand, within Pf6N2E2_5242 at 6039.951 kb on - strand, within Pf6N2E2_5242 at 6039.951 kb on - strand, within Pf6N2E2_5242 at 6040.101 kb on - strand, within Pf6N2E2_5242 at 6040.101 kb on - strand, within Pf6N2E2_5242 at 6040.361 kb on - strand at 6040.428 kb on - strand, within Pf6N2E2_5243 at 6040.469 kb on - strand, within Pf6N2E2_5243 at 6040.564 kb on + strand at 6040.590 kb on - strand at 6040.694 kb on + strand at 6040.850 kb on - strand at 6040.850 kb on - strand at 6040.850 kb on - strand at 6040.892 kb on - strand at 6041.006 kb on - strand at 6041.051 kb on + strand at 6041.051 kb on + strand at 6041.051 kb on + strand at 6041.052 kb on - strand at 6041.052 kb on - strand at 6041.052 kb on - strand at 6041.053 kb on + strand at 6041.054 kb on - strand at 6041.054 kb on - strand at 6041.101 kb on + strand at 6041.346 kb on + strand at 6041.346 kb on + strand at 6041.346 kb on + strand at 6041.346 kb on + strand at 6041.405 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.420 kb on + strand at 6041.421 kb on - strand at 6041.421 kb on - strand at 6041.421 kb on - strand at 6041.421 kb on - strand at 6041.481 kb on + strand at 6041.498 kb on + strand at 6041.498 kb on + strand at 6041.498 kb on + strand at 6041.499 kb on - strand at 6041.523 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction selenate 0.5 M remove 6,039,777 - Pf6N2E2_5242 0.59 -1.1 6,039,950 + Pf6N2E2_5242 0.71 +0.7 6,039,951 - Pf6N2E2_5242 0.71 +0.3 6,039,951 - Pf6N2E2_5242 0.71 -0.9 6,040,101 - Pf6N2E2_5242 0.81 -1.3 6,040,101 - Pf6N2E2_5242 0.81 -1.7 6,040,361 - +0.7 6,040,428 - Pf6N2E2_5243 0.26 -0.1 6,040,469 - Pf6N2E2_5243 0.48 -1.7 6,040,564 + -0.3 6,040,590 - -0.3 6,040,694 + +0.4 6,040,850 - +0.9 6,040,850 - +0.5 6,040,850 - +0.8 6,040,892 - +0.8 6,041,006 - +0.2 6,041,051 + -0.2 6,041,051 + +0.6 6,041,051 + +4.0 6,041,052 - -0.0 6,041,052 - +0.4 6,041,052 - -0.2 6,041,053 + -1.7 6,041,054 - -1.1 6,041,054 - +1.0 6,041,101 + +0.4 6,041,346 + +0.7 6,041,346 + +0.2 6,041,346 + -0.3 6,041,346 + -2.9 6,041,405 + -0.7 6,041,420 + +0.5 6,041,420 + +0.1 6,041,420 + +0.1 6,041,420 + -0.1 6,041,420 + -0.2 6,041,421 - -1.1 6,041,421 - +1.2 6,041,421 - +2.0 6,041,421 - -0.5 6,041,481 + +0.6 6,041,498 + -0.1 6,041,498 + +0.2 6,041,498 + -0.4 6,041,499 - +0.1 6,041,523 - +0.8
Or see this region's nucleotide sequence