Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05455 and H281DRAFT_05456 are separated by 7 nucleotides H281DRAFT_05456 and H281DRAFT_05457 overlap by 4 nucleotides H281DRAFT_05457 and H281DRAFT_05458 are separated by 41 nucleotides
H281DRAFT_05455: H281DRAFT_05455 - 2-keto-4-pentenoate hydratase, at 35,377 to 36,180
_05455
H281DRAFT_05456: H281DRAFT_05456 - 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase, at 36,188 to 37,063
_05456
H281DRAFT_05457: H281DRAFT_05457 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase, at 37,060 to 37,995
_05457
H281DRAFT_05458: H281DRAFT_05458 - Sugar phosphate permease, at 38,037 to 39,422
_05458
Position (kb) 37
38 Strain fitness (log2 ratio) -1
0
1 at 36.092 kb on + strand, within H281DRAFT_05455 at 36.125 kb on + strand at 36.125 kb on + strand at 36.144 kb on + strand at 36.172 kb on - strand at 36.490 kb on - strand, within H281DRAFT_05456 at 36.493 kb on + strand, within H281DRAFT_05456 at 36.494 kb on - strand, within H281DRAFT_05456 at 36.513 kb on - strand, within H281DRAFT_05456 at 36.944 kb on + strand, within H281DRAFT_05456 at 37.006 kb on - strand at 37.239 kb on + strand, within H281DRAFT_05457 at 37.397 kb on + strand, within H281DRAFT_05457 at 37.507 kb on + strand, within H281DRAFT_05457 at 37.767 kb on - strand, within H281DRAFT_05457 at 37.814 kb on + strand, within H281DRAFT_05457 at 37.999 kb on + strand at 37.999 kb on + strand at 38.039 kb on - strand at 38.222 kb on + strand, within H281DRAFT_05458 at 38.611 kb on + strand, within H281DRAFT_05458 at 38.612 kb on - strand, within H281DRAFT_05458 at 38.626 kb on + strand, within H281DRAFT_05458 at 38.626 kb on + strand, within H281DRAFT_05458 at 38.627 kb on - strand, within H281DRAFT_05458 at 38.627 kb on - strand, within H281DRAFT_05458 at 38.627 kb on - strand, within H281DRAFT_05458 at 38.627 kb on - strand, within H281DRAFT_05458 at 38.627 kb on - strand, within H281DRAFT_05458 at 38.635 kb on + strand, within H281DRAFT_05458
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 36,092 + H281DRAFT_05455 0.89 +0.2 36,125 + -0.0 36,125 + +0.5 36,144 + -0.5 36,172 - -0.3 36,490 - H281DRAFT_05456 0.34 -0.3 36,493 + H281DRAFT_05456 0.35 -0.0 36,494 - H281DRAFT_05456 0.35 +0.1 36,513 - H281DRAFT_05456 0.37 +0.5 36,944 + H281DRAFT_05456 0.86 +1.1 37,006 - -0.1 37,239 + H281DRAFT_05457 0.19 +0.7 37,397 + H281DRAFT_05457 0.36 +0.4 37,507 + H281DRAFT_05457 0.48 +0.1 37,767 - H281DRAFT_05457 0.76 +1.1 37,814 + H281DRAFT_05457 0.81 +0.3 37,999 + +0.4 37,999 + +0.2 38,039 - +0.1 38,222 + H281DRAFT_05458 0.13 -0.6 38,611 + H281DRAFT_05458 0.41 -0.5 38,612 - H281DRAFT_05458 0.41 -0.2 38,626 + H281DRAFT_05458 0.42 -0.5 38,626 + H281DRAFT_05458 0.42 +1.0 38,627 - H281DRAFT_05458 0.43 +0.0 38,627 - H281DRAFT_05458 0.43 +0.4 38,627 - H281DRAFT_05458 0.43 -0.4 38,627 - H281DRAFT_05458 0.43 +0.0 38,627 - H281DRAFT_05458 0.43 -0.0 38,635 + H281DRAFT_05458 0.43 +0.5
Or see this region's nucleotide sequence