Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04080 and H281DRAFT_04081 are separated by 14 nucleotides H281DRAFT_04081 and H281DRAFT_04082 are separated by 75 nucleotides
H281DRAFT_04080: H281DRAFT_04080 - luciferase family oxidoreductase, group 1, at 184,076 to 185,095
_04080
H281DRAFT_04081: H281DRAFT_04081 - deoxyuridine 5'-triphosphate nucleotidohydrolase, at 185,110 to 185,556
_04081
H281DRAFT_04082: H281DRAFT_04082 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 185,632 to 187,929
_04082
Position (kb) 185
186 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 184.185 kb on - strand, within H281DRAFT_04080 at 184.248 kb on + strand, within H281DRAFT_04080 at 184.249 kb on - strand, within H281DRAFT_04080 at 184.249 kb on - strand, within H281DRAFT_04080 at 184.319 kb on + strand, within H281DRAFT_04080 at 184.320 kb on - strand, within H281DRAFT_04080 at 184.449 kb on - strand at 184.449 kb on - strand, within H281DRAFT_04080 at 184.539 kb on + strand, within H281DRAFT_04080 at 184.730 kb on + strand, within H281DRAFT_04080 at 184.827 kb on - strand, within H281DRAFT_04080 at 184.877 kb on + strand, within H281DRAFT_04080 at 184.924 kb on + strand, within H281DRAFT_04080 at 184.924 kb on + strand, within H281DRAFT_04080 at 184.925 kb on - strand at 184.968 kb on + strand, within H281DRAFT_04080 at 185.022 kb on - strand at 185.043 kb on - strand at 185.043 kb on - strand at 185.620 kb on + strand at 185.634 kb on - strand at 186.201 kb on - strand, within H281DRAFT_04082 at 186.201 kb on - strand, within H281DRAFT_04082 at 186.350 kb on + strand, within H281DRAFT_04082 at 186.351 kb on - strand, within H281DRAFT_04082 at 186.351 kb on - strand, within H281DRAFT_04082 at 186.351 kb on - strand, within H281DRAFT_04082
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 184,185 - H281DRAFT_04080 0.11 +0.6 184,248 + H281DRAFT_04080 0.17 +0.1 184,249 - H281DRAFT_04080 0.17 +0.6 184,249 - H281DRAFT_04080 0.17 -0.8 184,319 + H281DRAFT_04080 0.24 +0.4 184,320 - H281DRAFT_04080 0.24 -0.1 184,449 - -1.2 184,449 - H281DRAFT_04080 0.37 +0.3 184,539 + H281DRAFT_04080 0.45 +0.4 184,730 + H281DRAFT_04080 0.64 -0.1 184,827 - H281DRAFT_04080 0.74 +0.0 184,877 + H281DRAFT_04080 0.79 -0.6 184,924 + H281DRAFT_04080 0.83 +0.1 184,924 + H281DRAFT_04080 0.83 -0.8 184,925 - -0.8 184,968 + H281DRAFT_04080 0.87 -0.3 185,022 - -0.2 185,043 - -0.5 185,043 - -1.4 185,620 + +0.1 185,634 - +0.0 186,201 - H281DRAFT_04082 0.25 -1.7 186,201 - H281DRAFT_04082 0.25 -1.5 186,350 + H281DRAFT_04082 0.31 -1.4 186,351 - H281DRAFT_04082 0.31 -3.0 186,351 - H281DRAFT_04082 0.31 -1.6 186,351 - H281DRAFT_04082 0.31 -3.5
Or see this region's nucleotide sequence