Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02764

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02763 and H281DRAFT_02764 overlap by 4 nucleotidesH281DRAFT_02764 and H281DRAFT_02765 are separated by 98 nucleotidesH281DRAFT_02765 and H281DRAFT_02766 are separated by 146 nucleotides H281DRAFT_02763: H281DRAFT_02763 - selenium-binding protein 1, at 351,228 to 352,634 _02763 H281DRAFT_02764: H281DRAFT_02764 - hypothetical protein, at 352,631 to 353,308 _02764 H281DRAFT_02765: H281DRAFT_02765 - Protein of unknown function (DUF2795), at 353,407 to 353,640 _02765 H281DRAFT_02766: H281DRAFT_02766 - hypothetical protein, at 353,787 to 355,844 _02766 Position (kb) 352 353 354Strain fitness (log2 ratio) -1 0 1at 351.666 kb on + strand, within H281DRAFT_02763at 351.667 kb on - strand, within H281DRAFT_02763at 351.825 kb on + strand, within H281DRAFT_02763at 351.827 kb on + strand, within H281DRAFT_02763at 351.828 kb on - strand, within H281DRAFT_02763at 352.230 kb on + strand, within H281DRAFT_02763at 352.231 kb on - strand, within H281DRAFT_02763at 352.236 kb on + strand, within H281DRAFT_02763at 352.273 kb on - strand, within H281DRAFT_02763at 352.689 kb on - strandat 353.180 kb on + strand, within H281DRAFT_02764at 353.181 kb on - strand, within H281DRAFT_02764at 353.191 kb on - strand, within H281DRAFT_02764at 353.392 kb on + strandat 353.716 kb on - strandat 353.727 kb on + strandat 353.956 kb on - strandat 354.085 kb on - strand, within H281DRAFT_02766at 354.144 kb on + strand, within H281DRAFT_02766

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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351,666 + H281DRAFT_02763 0.31 +0.4
351,667 - H281DRAFT_02763 0.31 +0.3
351,825 + H281DRAFT_02763 0.42 -0.1
351,827 + H281DRAFT_02763 0.43 -0.2
351,828 - H281DRAFT_02763 0.43 -0.2
352,230 + H281DRAFT_02763 0.71 -0.1
352,231 - H281DRAFT_02763 0.71 +0.2
352,236 + H281DRAFT_02763 0.72 +0.1
352,273 - H281DRAFT_02763 0.74 +0.0
352,689 - +0.3
353,180 + H281DRAFT_02764 0.81 +0.7
353,181 - H281DRAFT_02764 0.81 +0.3
353,191 - H281DRAFT_02764 0.83 +0.4
353,392 + +0.8
353,716 - +0.3
353,727 + +0.4
353,956 - +0.4
354,085 - H281DRAFT_02766 0.14 -0.3
354,144 + H281DRAFT_02766 0.17 +0.6

Or see this region's nucleotide sequence