Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01504 and H281DRAFT_01505 are separated by 394 nucleotides H281DRAFT_01505 and H281DRAFT_01506 are separated by 29 nucleotides H281DRAFT_01506 and H281DRAFT_01507 are separated by 78 nucleotides
H281DRAFT_01504: H281DRAFT_01504 - 3-oxoadipyl-CoA thiolase, at 373,667 to 374,869
_01504
H281DRAFT_01505: H281DRAFT_01505 - Nucleoside-diphosphate-sugar epimerase, at 375,264 to 376,244
_01505
H281DRAFT_01506: H281DRAFT_01506 - hydroxypyruvate isomerase, at 376,274 to 377,059
_01506
H281DRAFT_01507: H281DRAFT_01507 - D-galactonate transporter, at 377,138 to 378,472
_01507
Position (kb) 375
376
377 Strain fitness (log2 ratio) -2
-1
0
1 at 374.349 kb on + strand, within H281DRAFT_01504 at 374.397 kb on + strand, within H281DRAFT_01504 at 374.398 kb on - strand, within H281DRAFT_01504 at 374.449 kb on - strand, within H281DRAFT_01504 at 374.449 kb on - strand, within H281DRAFT_01504 at 374.636 kb on - strand, within H281DRAFT_01504 at 374.710 kb on - strand, within H281DRAFT_01504 at 374.710 kb on - strand, within H281DRAFT_01504 at 374.749 kb on + strand at 374.988 kb on - strand at 375.077 kb on + strand at 375.132 kb on - strand at 375.232 kb on + strand at 375.244 kb on - strand at 375.381 kb on - strand, within H281DRAFT_01505 at 375.796 kb on + strand, within H281DRAFT_01505 at 376.264 kb on + strand at 376.265 kb on - strand at 376.290 kb on + strand at 376.354 kb on - strand, within H281DRAFT_01506 at 376.399 kb on - strand, within H281DRAFT_01506 at 376.522 kb on - strand, within H281DRAFT_01506 at 376.695 kb on + strand, within H281DRAFT_01506 at 377.174 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 374,349 + H281DRAFT_01504 0.57 +0.1 374,397 + H281DRAFT_01504 0.61 -0.5 374,398 - H281DRAFT_01504 0.61 +0.1 374,449 - H281DRAFT_01504 0.65 +0.1 374,449 - H281DRAFT_01504 0.65 -0.4 374,636 - H281DRAFT_01504 0.81 -0.8 374,710 - H281DRAFT_01504 0.87 -0.3 374,710 - H281DRAFT_01504 0.87 -0.7 374,749 + +0.6 374,988 - +0.5 375,077 + -0.7 375,132 - +0.4 375,232 + +0.3 375,244 - -0.2 375,381 - H281DRAFT_01505 0.12 +0.6 375,796 + H281DRAFT_01505 0.54 +0.3 376,264 + -0.6 376,265 - -0.4 376,290 + +0.3 376,354 - H281DRAFT_01506 0.10 +0.0 376,399 - H281DRAFT_01506 0.16 +0.3 376,522 - H281DRAFT_01506 0.32 +0.4 376,695 + H281DRAFT_01506 0.54 +0.1 377,174 - -1.8
Or see this region's nucleotide sequence