Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01054 and H281DRAFT_01055 are separated by 60 nucleotides H281DRAFT_01055 and H281DRAFT_01056 overlap by 4 nucleotides H281DRAFT_01056 and H281DRAFT_01057 overlap by 17 nucleotides
H281DRAFT_01054: H281DRAFT_01054 - (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 1,183,724 to 1,184,794
_01054
H281DRAFT_01055: H281DRAFT_01055 - monosaccharide ABC transporter membrane protein, CUT2 family, at 1,184,855 to 1,185,823
_01055
H281DRAFT_01056: H281DRAFT_01056 - monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-), at 1,185,820 to 1,186,803
_01056
H281DRAFT_01057: H281DRAFT_01057 - monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-), at 1,186,787 to 1,188,340
_01057
Position (kb)
1184
1185
1186 Strain fitness (log2 ratio)
-2
-1
0
1 at 1183.917 kb on - strand, within H281DRAFT_01054 at 1184.485 kb on - strand, within H281DRAFT_01054 at 1184.485 kb on - strand, within H281DRAFT_01054 at 1184.877 kb on + strand at 1185.153 kb on - strand, within H281DRAFT_01055 at 1185.157 kb on - strand, within H281DRAFT_01055 at 1185.157 kb on - strand, within H281DRAFT_01055 at 1185.299 kb on + strand, within H281DRAFT_01055 at 1185.300 kb on - strand, within H281DRAFT_01055 at 1185.558 kb on - strand, within H281DRAFT_01055 at 1185.608 kb on + strand, within H281DRAFT_01055 at 1185.747 kb on + strand at 1185.747 kb on + strand at 1186.092 kb on + strand, within H281DRAFT_01056 at 1186.199 kb on - strand, within H281DRAFT_01056 at 1186.200 kb on - strand, within H281DRAFT_01056 at 1186.205 kb on + strand at 1186.206 kb on - strand, within H281DRAFT_01056 at 1186.301 kb on + strand, within H281DRAFT_01056 at 1186.355 kb on + strand, within H281DRAFT_01056
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,183,917 - H281DRAFT_01054 0.18 +0.0 1,184,485 - H281DRAFT_01054 0.71 +0.0 1,184,485 - H281DRAFT_01054 0.71 -0.0 1,184,877 + +1.1 1,185,153 - H281DRAFT_01055 0.31 +0.5 1,185,157 - H281DRAFT_01055 0.31 +0.4 1,185,157 - H281DRAFT_01055 0.31 +0.1 1,185,299 + H281DRAFT_01055 0.46 -0.2 1,185,300 - H281DRAFT_01055 0.46 +0.7 1,185,558 - H281DRAFT_01055 0.73 -0.1 1,185,608 + H281DRAFT_01055 0.78 -0.2 1,185,747 + -2.0 1,185,747 + +0.4 1,186,092 + H281DRAFT_01056 0.28 +0.7 1,186,199 - H281DRAFT_01056 0.39 +0.3 1,186,200 - H281DRAFT_01056 0.39 +0.2 1,186,205 + +1.6 1,186,206 - H281DRAFT_01056 0.39 -0.1 1,186,301 + H281DRAFT_01056 0.49 -0.1 1,186,355 + H281DRAFT_01056 0.54 -0.0
Or see this region's nucleotide sequence