Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00817 and H281DRAFT_00818 are separated by 216 nucleotides H281DRAFT_00818 and H281DRAFT_00819 are separated by 210 nucleotides H281DRAFT_00819 and H281DRAFT_00820 are separated by 322 nucleotides H281DRAFT_00820 and H281DRAFT_00821 overlap by 49 nucleotides
H281DRAFT_00817: H281DRAFT_00817 - ATP-dependent Clp protease ATP-binding subunit ClpB, at 905,375 to 907,972
_00817
H281DRAFT_00818: H281DRAFT_00818 - Uncharacterized protein conserved in bacteria, at 908,189 to 908,617
_00818
H281DRAFT_00819: H281DRAFT_00819 - competence protein ComEA, at 908,828 to 909,439
_00819
H281DRAFT_00820: H281DRAFT_00820 - DNA-binding transcriptional regulator, MerR family, at 909,762 to 910,268
_00820
H281DRAFT_00821: H281DRAFT_00821 - 4-carboxymuconolactone decarboxylase, at 910,220 to 910,657
_00821
Position (kb) 908
909
910 Strain fitness (log2 ratio) -1
0
1 at 907.997 kb on + strand at 907.997 kb on + strand at 907.998 kb on - strand at 908.072 kb on - strand at 908.175 kb on + strand at 908.175 kb on + strand at 909.005 kb on - strand, within H281DRAFT_00819 at 909.511 kb on - strand at 909.536 kb on - strand at 909.580 kb on - strand at 909.580 kb on - strand at 909.600 kb on + strand at 909.696 kb on - strand at 909.827 kb on + strand, within H281DRAFT_00820 at 909.838 kb on - strand, within H281DRAFT_00820 at 909.840 kb on + strand, within H281DRAFT_00820 at 910.114 kb on - strand, within H281DRAFT_00820 at 910.116 kb on + strand, within H281DRAFT_00820 at 910.117 kb on - strand, within H281DRAFT_00820 at 910.366 kb on + strand, within H281DRAFT_00821 at 910.367 kb on - strand, within H281DRAFT_00821 at 910.370 kb on + strand, within H281DRAFT_00821 at 910.370 kb on + strand, within H281DRAFT_00821 at 910.370 kb on + strand, within H281DRAFT_00821 at 910.371 kb on - strand, within H281DRAFT_00821
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 907,997 + +0.7 907,997 + -1.1 907,998 - +0.3 908,072 - +0.1 908,175 + +0.0 908,175 + +1.2 909,005 - H281DRAFT_00819 0.29 +0.8 909,511 - +0.1 909,536 - -1.4 909,580 - +0.1 909,580 - +0.3 909,600 + -0.1 909,696 - -0.6 909,827 + H281DRAFT_00820 0.13 +0.8 909,838 - H281DRAFT_00820 0.15 -0.2 909,840 + H281DRAFT_00820 0.15 -0.2 910,114 - H281DRAFT_00820 0.69 -0.1 910,116 + H281DRAFT_00820 0.70 +0.9 910,117 - H281DRAFT_00820 0.70 -0.4 910,366 + H281DRAFT_00821 0.33 +0.5 910,367 - H281DRAFT_00821 0.34 -0.3 910,370 + H281DRAFT_00821 0.34 -0.4 910,370 + H281DRAFT_00821 0.34 +0.3 910,370 + H281DRAFT_00821 0.34 -0.3 910,371 - H281DRAFT_00821 0.34 -0.0
Or see this region's nucleotide sequence