Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30500

Experiment: m.b. perchlorate 50 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. perchlorate 50 mM
3,184,834	-				-1.4
3,184,836	+				+0.2
3,184,836	+				+1.3
3,184,846	+				+0.1
3,184,863	+				-0.4
3,184,886	+		PGA1_c30490	0.11	+0.4
3,184,891	+		PGA1_c30490	0.11	-0.4
3,184,896	+		PGA1_c30490	0.12	-0.5
3,184,904	-		PGA1_c30490	0.13	-0.4
3,184,939	+		PGA1_c30490	0.16	-1.0
3,184,939	+		PGA1_c30490	0.16	+2.3
3,184,939	+		PGA1_c30490	0.16	-0.4
3,184,947	-		PGA1_c30490	0.17	-1.6
3,184,949	+		PGA1_c30490	0.17	+1.3
3,184,953	-		PGA1_c30490	0.18	+0.6
3,184,953	-		PGA1_c30490	0.18	-0.0
3,184,957	-		PGA1_c30490	0.18	-1.0
3,184,966	+		PGA1_c30490	0.19	+0.5
3,184,966	+		PGA1_c30490	0.19	-0.2
3,184,968	+		PGA1_c30490	0.19	+0.3
3,184,968	+		PGA1_c30490	0.19	+0.2
3,184,974	-		PGA1_c30490	0.20	-0.8
3,184,974	-		PGA1_c30490	0.20	-1.5
3,184,976	+		PGA1_c30490	0.20	+0.6
3,184,976	-		PGA1_c30490	0.20	+0.5
3,184,976	-		PGA1_c30490	0.20	-0.2
3,185,010	+		PGA1_c30490	0.24	-1.0
3,185,022	+		PGA1_c30490	0.25	+1.3
3,185,022	+		PGA1_c30490	0.25	+0.4
3,185,028	+		PGA1_c30490	0.25	-0.2
3,185,030	-		PGA1_c30490	0.26	+0.3
3,185,030	-		PGA1_c30490	0.26	+0.1
3,185,105	-		PGA1_c30490	0.33	+0.2
3,185,129	-		PGA1_c30490	0.36	-1.0
3,185,227	+		PGA1_c30490	0.46	+0.2
3,185,227	+		PGA1_c30490	0.46	-1.3
3,185,234	-		PGA1_c30490	0.47	+0.4
3,185,270	-		PGA1_c30490	0.51	-0.8
3,185,278	+		PGA1_c30490	0.51	+0.5
3,185,279	-		PGA1_c30490	0.52	-0.6
3,185,279	-		PGA1_c30490	0.52	-0.5
3,185,293	+		PGA1_c30490	0.53	-0.4
3,185,342	+		PGA1_c30490	0.58	-0.0
3,185,342	+		PGA1_c30490	0.58	-0.1
3,185,350	-		PGA1_c30490	0.59	-0.1
3,185,350	-		PGA1_c30490	0.59	+0.6
3,185,350	-		PGA1_c30490	0.59	+0.1
3,185,350	-		PGA1_c30490	0.59	-0.8
3,185,350	-		PGA1_c30490	0.59	-1.7
3,185,380	-		PGA1_c30490	0.62	+1.3
3,185,485	+		PGA1_c30490	0.73	-0.8
3,185,490	+		PGA1_c30490	0.73	+0.8
3,185,519	-		PGA1_c30490	0.76	+0.7
3,185,565	+		PGA1_c30490	0.81	+1.0
3,185,576	+		PGA1_c30490	0.82	-2.4
3,185,576	+		PGA1_c30490	0.82	+0.9
3,185,623	+		PGA1_c30490	0.87	+0.5
3,185,631	-		PGA1_c30490	0.88	+0.1
3,185,631	-		PGA1_c30490	0.88	+0.7
3,185,681	-				+0.8
3,185,695	-				+0.0
3,185,695	-				-0.3
3,185,697	+				+0.7
3,185,697	+				+1.0
3,185,717	+				+0.5
3,185,725	-				+0.0
3,185,781	+				-0.4
3,185,782	-				-1.1
3,185,786	+				-0.6
3,185,815	-				+1.2
3,185,823	+				-0.1
3,185,825	-				-0.3
3,185,826	-				-0.1
3,185,834	+				+0.6
3,185,842	-				+0.3
3,185,844	+				-0.3
3,185,854	+				+1.1
3,185,854	+				+0.0
3,185,859	+				+0.6
3,185,927	+		PGA1_c30500	0.17	+0.1
3,185,935	-		PGA1_c30500	0.18	-0.5
3,186,002	+		PGA1_c30500	0.29	-1.0
3,186,002	+		PGA1_c30500	0.29	+0.6
3,186,002	+		PGA1_c30500	0.29	-0.3
3,186,002	+		PGA1_c30500	0.29	-0.2
3,186,002	+		PGA1_c30500	0.29	+0.7
3,186,007	+		PGA1_c30500	0.30	-0.5
3,186,007	+		PGA1_c30500	0.30	-0.2
3,186,007	+		PGA1_c30500	0.30	+0.2
3,186,007	+		PGA1_c30500	0.30	-1.3
3,186,010	-		PGA1_c30500	0.30	-0.7
3,186,010	-		PGA1_c30500	0.30	-1.7
3,186,010	-		PGA1_c30500	0.30	-0.6
3,186,010	-		PGA1_c30500	0.30	+0.2
3,186,010	-		PGA1_c30500	0.30	-0.0
3,186,026	+		PGA1_c30500	0.33	+0.6
3,186,145	-		PGA1_c30500	0.52	+0.5
3,186,153	-		PGA1_c30500	0.54	-0.8
3,186,153	-		PGA1_c30500	0.54	+0.3
3,186,167	-		PGA1_c30500	0.56	-0.6
3,186,182	-		PGA1_c30500	0.59	-0.2
3,186,193	+		PGA1_c30500	0.60	+0.3
3,186,261	-		PGA1_c30500	0.72	-0.4
3,186,282	+		PGA1_c30500	0.75	+0.4
3,186,287	+		PGA1_c30500	0.76	-0.1
3,186,290	-		PGA1_c30500	0.76	+1.0
3,186,290	-		PGA1_c30500	0.76	-1.2
3,186,295	-		PGA1_c30500	0.77	-0.1
3,186,328	-		PGA1_c30500	0.83	-1.0
3,186,336	+		PGA1_c30500	0.84	-0.4
3,186,345	+		PGA1_c30500	0.85	+0.0
3,186,346	+		PGA1_c30500	0.86	-0.7
3,186,387	+				-0.9
3,186,390	-				+0.8
3,186,390	-				-1.7
3,186,406	+				+0.7
3,186,414	-				-0.3
3,186,417	+				-0.3
3,186,422	-				+1.4
3,186,498	+				-2.2
3,186,505	-				+0.3
3,186,524	-				+0.2
3,186,558	+		PGA1_c30510	0.16	+0.6
3,186,576	+		PGA1_c30510	0.20	+0.6
3,186,584	-		PGA1_c30510	0.22	+0.5
3,186,584	-		PGA1_c30510	0.22	+0.1
3,186,584	-		PGA1_c30510	0.22	-1.1
3,186,599	+		PGA1_c30510	0.25	-0.2
3,186,599	-		PGA1_c30510	0.25	+0.8
3,186,602	-		PGA1_c30510	0.26	+0.1
3,186,607	-		PGA1_c30510	0.27	-1.3
3,186,678	+		PGA1_c30510	0.43	-2.0
3,186,678	+		PGA1_c30510	0.43	+1.3
3,186,712	+		PGA1_c30510	0.50	+0.6
3,186,748	+		PGA1_c30510	0.58	+1.1
3,186,756	-		PGA1_c30510	0.60	+0.9
3,186,763	+		PGA1_c30510	0.62	+0.3
3,186,843	+		PGA1_c30510	0.79	+0.0
3,186,861	+		PGA1_c30510	0.83	+0.3
3,186,905	+				-0.1
3,186,917	+				-2.6
3,186,999	-				-0.7
3,187,022	-				-0.9
3,187,022	-				-0.1
3,187,048	-				-0.8
3,187,049	-				-0.7
3,187,054	-		PGA1_c30520	0.11	+0.4
3,187,066	-		PGA1_c30520	0.12	-1.8
3,187,078	-		PGA1_c30520	0.14	-0.1
3,187,090	+		PGA1_c30520	0.16	+0.6
3,187,167	+		PGA1_c30520	0.29	+0.8
3,187,182	+		PGA1_c30520	0.31	+0.7
3,187,182	+		PGA1_c30520	0.31	-0.1
3,187,182	+		PGA1_c30520	0.31	-0.1
3,187,182	+		PGA1_c30520	0.31	+0.2
3,187,182	+		PGA1_c30520	0.31	+0.4
3,187,190	-		PGA1_c30520	0.33	-2.8
3,187,190	-		PGA1_c30520	0.33	-1.8
3,187,190	-		PGA1_c30520	0.33	-0.8
3,187,190	-		PGA1_c30520	0.33	-0.4
3,187,190	-		PGA1_c30520	0.33	+1.5
3,187,190	-		PGA1_c30520	0.33	+1.3
3,187,190	-		PGA1_c30520	0.33	+0.4
3,187,201	+		PGA1_c30520	0.34	-0.6
3,187,209	-		PGA1_c30520	0.36	-0.4
3,187,210	-		PGA1_c30520	0.36	+0.1
3,187,224	+		PGA1_c30520	0.38	+0.0
3,187,230	-		PGA1_c30520	0.39	+0.3
3,187,266	-		PGA1_c30520	0.45	-0.5
3,187,266	-		PGA1_c30520	0.45	-0.4
3,187,266	-		PGA1_c30520	0.45	+0.3
3,187,310	+		PGA1_c30520	0.52	-0.1
3,187,310	+		PGA1_c30520	0.52	-0.3
3,187,318	-		PGA1_c30520	0.53	+0.9
3,187,339	+		PGA1_c30520	0.57	-1.5
3,187,347	-		PGA1_c30520	0.58	+0.3
3,187,356	+		PGA1_c30520	0.59	-1.0
3,187,363	+		PGA1_c30520	0.61	+1.1
3,187,369	+		PGA1_c30520	0.61	+1.8
3,187,369	+		PGA1_c30520	0.61	+1.0
3,187,369	+		PGA1_c30520	0.61	+0.3
3,187,369	+		PGA1_c30520	0.61	+0.4
3,187,370	-		PGA1_c30520	0.62	-2.7
3,187,377	-		PGA1_c30520	0.63	+0.9
3,187,398	+		PGA1_c30520	0.66	+0.5
3,187,398	+		PGA1_c30520	0.66	-1.5
3,187,399	+		PGA1_c30520	0.66	+0.3