Strain Fitness in Dechlorosoma suillum PS around Dsui_3448
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
3,706,848 | + | -0.8 | |||
3,706,958 | - | +0.2 | |||
3,707,138 | - | Dsui_3447 | 0.69 | -1.4 | |
3,707,399 | + | +0.2 | |||
3,707,400 | - | Dsui_3447 | 0.88 | -1.4 | |
3,707,432 | + | +0.2 | |||
3,707,475 | + | +0.2 | |||
3,707,633 | - | Dsui_3448 | 0.11 | -1.8 | |
3,707,635 | + | -1.4 | |||
3,707,824 | - | Dsui_3448 | 0.38 | -2.6 | |
3,707,907 | - | Dsui_3448 | 0.50 | -2.1 | |
3,708,043 | - | Dsui_3448 | 0.69 | -1.4 | |
3,708,103 | - | Dsui_3448 | 0.78 | -0.8 | |
3,708,134 | + | +0.2 | |||
3,708,137 | - | Dsui_3448 | 0.83 | -0.8 | |
3,708,234 | - | -2.4 | |||
3,708,266 | - | +0.2 | |||
3,708,266 | - | +0.2 | |||
3,708,339 | - | +0.2 | |||
3,708,667 | + | Dsui_3449 | 0.16 | +0.3 | |
3,708,726 | - | Dsui_3449 | 0.19 | -2.4 | |
3,709,049 | - | -0.8 | |||
3,709,183 | + | Dsui_3449 | 0.40 | +0.1 | |
3,709,209 | + | Dsui_3449 | 0.41 | +0.1 | |
3,709,223 | - | Dsui_3449 | 0.42 | +0.2 | |
3,709,256 | + | Dsui_3449 | 0.43 | +0.2 |
Or see this region's nucleotide sequence