Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3437 and Dsui_3438 are separated by 13 nucleotides Dsui_3438 and Dsui_3439 are separated by 145 nucleotides
Dsui_3437: Dsui_3437 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 3,690,225 to 3,693,257
_3437
Dsui_3438: Dsui_3438 - beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase, at 3,693,271 to 3,694,170
_3438
Dsui_3439: Dsui_3439 - methyl-accepting chemotaxis protein, at 3,694,316 to 3,695,965
_3439
Position (kb)
3693
3694
3695 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3692.409 kb on - strand, within Dsui_3437 at 3692.487 kb on + strand at 3692.526 kb on - strand, within Dsui_3437 at 3692.545 kb on - strand, within Dsui_3437 at 3692.605 kb on - strand, within Dsui_3437 at 3692.669 kb on - strand, within Dsui_3437 at 3692.700 kb on - strand, within Dsui_3437 at 3692.736 kb on + strand at 3692.807 kb on - strand, within Dsui_3437 at 3692.870 kb on - strand, within Dsui_3437 at 3692.883 kb on - strand, within Dsui_3437 at 3693.188 kb on - strand at 3693.411 kb on + strand at 3693.541 kb on + strand, within Dsui_3438 at 3693.549 kb on - strand, within Dsui_3438 at 3693.618 kb on + strand at 3693.883 kb on - strand, within Dsui_3438 at 3693.943 kb on + strand, within Dsui_3438 at 3693.981 kb on + strand, within Dsui_3438 at 3694.106 kb on + strand at 3694.124 kb on - strand at 3694.151 kb on - strand at 3694.409 kb on + strand at 3694.504 kb on + strand, within Dsui_3439 at 3694.523 kb on - strand, within Dsui_3439 at 3694.540 kb on + strand, within Dsui_3439 at 3694.853 kb on - strand, within Dsui_3439 at 3694.969 kb on + strand at 3695.060 kb on - strand, within Dsui_3439 at 3695.086 kb on + strand, within Dsui_3439 at 3695.094 kb on - strand, within Dsui_3439 at 3695.119 kb on + strand at 3695.160 kb on - strand, within Dsui_3439
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 3,692,409 - Dsui_3437 0.72 -0.1 3,692,487 + +0.2 3,692,526 - Dsui_3437 0.76 -0.0 3,692,545 - Dsui_3437 0.76 -0.0 3,692,605 - Dsui_3437 0.78 +0.1 3,692,669 - Dsui_3437 0.81 -0.5 3,692,700 - Dsui_3437 0.82 -0.3 3,692,736 + +0.2 3,692,807 - Dsui_3437 0.85 -0.4 3,692,870 - Dsui_3437 0.87 -0.0 3,692,883 - Dsui_3437 0.88 -0.5 3,693,188 - -0.3 3,693,411 + +0.2 3,693,541 + Dsui_3438 0.30 -2.8 3,693,549 - Dsui_3438 0.31 +0.0 3,693,618 + +0.2 3,693,883 - Dsui_3438 0.68 +0.0 3,693,943 + Dsui_3438 0.75 -1.4 3,693,981 + Dsui_3438 0.79 -2.6 3,694,106 + +0.2 3,694,124 - +0.0 3,694,151 - +0.0 3,694,409 + -2.8 3,694,504 + Dsui_3439 0.11 -1.8 3,694,523 - Dsui_3439 0.13 -0.9 3,694,540 + Dsui_3439 0.14 +0.2 3,694,853 - Dsui_3439 0.33 -0.1 3,694,969 + -1.4 3,695,060 - Dsui_3439 0.45 -1.2 3,695,086 + Dsui_3439 0.47 -1.8 3,695,094 - Dsui_3439 0.47 -0.9 3,695,119 + +0.2 3,695,160 - Dsui_3439 0.51 -0.1
Or see this region's nucleotide sequence