Strain Fitness in Dechlorosoma suillum PS around Dsui_3008
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
3,220,417 | - | Dsui_3006 | 0.11 | -2.4 | |
3,220,615 | - | Dsui_3006 | 0.43 | -2.6 | |
3,221,107 | - | Dsui_3007 | 0.46 | -1.8 | |
3,221,137 | + | -0.8 | |||
3,221,246 | - | +0.2 | |||
3,221,416 | - | Dsui_3008 | 0.31 | +0.2 | |
3,221,445 | - | Dsui_3008 | 0.37 | -1.4 | |
3,221,590 | - | Dsui_3008 | 0.66 | +0.2 | |
3,221,616 | - | Dsui_3008 | 0.71 | -2.1 | |
3,221,657 | + | Dsui_3008 | 0.79 | -3.0 | |
3,221,700 | - | -0.8 | |||
3,221,700 | - | Dsui_3008 | 0.88 | +0.2 | |
3,221,707 | - | Dsui_3008 | 0.89 | -2.1 | |
3,221,757 | - | +0.2 | |||
3,221,953 | - | +0.2 | |||
3,221,969 | - | +0.2 | |||
3,222,079 | + | +0.2 | |||
3,222,229 | - | +0.2 | |||
3,222,361 | - | Dsui_3009 | 0.27 | -0.8 | |
3,222,528 | + | Dsui_3009 | 0.37 | +0.2 | |
3,222,585 | + | -0.8 | |||
3,222,585 | + | +0.2 | |||
3,222,662 | + | +0.2 | |||
3,222,739 | - | Dsui_3009 | 0.50 | -1.4 |
Or see this region's nucleotide sequence