Strain Fitness in Dechlorosoma suillum PS around Dsui_2899
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
3,101,181 | - | -1.3 | |||
3,101,506 | - | -0.7 | |||
3,101,702 | + | +0.3 | |||
3,101,825 | - | +0.3 | |||
3,101,970 | + | -0.6 | |||
3,102,045 | - | -1.3 | |||
3,102,224 | + | -0.2 | |||
3,102,236 | + | -0.7 | |||
3,102,270 | + | Dsui_2899 | 0.13 | +0.1 | |
3,102,333 | - | -0.7 | |||
3,102,344 | - | +0.3 | |||
3,102,433 | + | Dsui_2899 | 0.32 | -0.9 | |
3,102,479 | + | Dsui_2899 | 0.37 | +0.2 | |
3,102,581 | + | Dsui_2899 | 0.48 | +0.2 | |
3,102,618 | + | Dsui_2899 | 0.53 | -0.5 | |
3,102,618 | + | Dsui_2899 | 0.53 | +0.1 | |
3,102,620 | - | +0.3 | |||
3,102,623 | + | Dsui_2899 | 0.53 | -1.5 | |
3,102,643 | + | Dsui_2899 | 0.55 | -0.0 | |
3,102,724 | - | +0.3 | |||
3,102,787 | + | Dsui_2899 | 0.72 | -0.1 | |
3,102,795 | - | +0.3 | |||
3,102,797 | - | Dsui_2899 | 0.73 | -0.7 | |
3,102,800 | - | -0.7 | |||
3,103,050 | + | -0.3 | |||
3,103,203 | + | Dsui_2900 | 0.12 | -0.1 | |
3,103,211 | - | Dsui_2900 | 0.12 | -1.3 | |
3,103,312 | + | Dsui_2900 | 0.19 | +0.3 | |
3,103,320 | - | Dsui_2900 | 0.19 | -2.3 | |
3,103,520 | + | Dsui_2900 | 0.33 | -1.7 | |
3,103,961 | - | Dsui_2900 | 0.63 | +0.3 | |
3,103,992 | - | Dsui_2900 | 0.65 | -1.7 | |
3,104,030 | + | +0.3 | |||
3,104,032 | - | Dsui_2900 | 0.67 | -1.3 |
Or see this region's nucleotide sequence