Strain Fitness in Dechlorosoma suillum PS around Dsui_2857
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
3,045,706 | + | Dsui_2856 | 0.57 | -0.7 | |
3,045,714 | - | Dsui_2856 | 0.58 | -0.1 | |
3,045,714 | - | Dsui_2856 | 0.58 | -0.0 | |
3,045,714 | - | Dsui_2856 | 0.58 | -0.1 | |
3,045,783 | - | Dsui_2856 | 0.61 | -0.1 | |
3,045,829 | - | Dsui_2856 | 0.63 | +0.4 | |
3,046,044 | + | +0.3 | |||
3,046,081 | - | Dsui_2856 | 0.76 | -0.6 | |
3,046,091 | + | Dsui_2856 | 0.76 | -1.2 | |
3,046,111 | - | Dsui_2856 | 0.77 | -0.1 | |
3,046,117 | - | Dsui_2856 | 0.78 | -0.0 | |
3,046,136 | - | Dsui_2856 | 0.79 | -0.0 | |
3,046,302 | - | Dsui_2856 | 0.87 | -0.4 | |
3,046,355 | + | +0.3 | |||
3,046,363 | - | Dsui_2856 | 0.90 | -0.2 | |
3,046,461 | + | -0.7 | |||
3,046,518 | + | +0.3 | |||
3,046,530 | + | -1.2 | |||
3,046,538 | - | -0.3 | |||
3,046,538 | - | -0.3 | |||
3,046,585 | - | +0.4 | |||
3,046,590 | - | -0.4 | |||
3,046,590 | - | -0.3 | |||
3,047,417 | - | -0.4 |
Or see this region's nucleotide sequence