Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2668 and Dsui_2669 are separated by 115 nucleotides Dsui_2669 and Dsui_2670 are separated by 89 nucleotides
Dsui_2668: Dsui_2668 - putative phosphatase, at 2,819,444 to 2,821,390
_2668
Dsui_2669: Dsui_2669 - ankyrin repeat-containing protein, at 2,821,506 to 2,822,252
_2669
Dsui_2670: Dsui_2670 - GMP synthase (glutamine-hydrolyzing), at 2,822,342 to 2,823,976
_2670
Position (kb)
2821
2822
2823 Strain fitness (log2 ratio)
-2
-1
0
1 at 2820.622 kb on - strand at 2820.653 kb on + strand, within Dsui_2668 at 2820.653 kb on + strand at 2820.665 kb on + strand at 2820.666 kb on - strand at 2820.692 kb on + strand at 2821.125 kb on + strand at 2821.339 kb on + strand at 2821.546 kb on + strand at 2821.638 kb on - strand at 2821.655 kb on + strand, within Dsui_2669 at 2821.824 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.893 kb on - strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.929 kb on + strand, within Dsui_2669 at 2822.075 kb on - strand at 2822.135 kb on - strand, within Dsui_2669 at 2822.135 kb on - strand, within Dsui_2669 at 2822.185 kb on - strand at 2822.241 kb on + strand at 2822.303 kb on + strand at 2822.311 kb on - strand at 2822.311 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 2,820,622 - +0.4 2,820,653 + Dsui_2668 0.62 -0.6 2,820,653 + +0.4 2,820,665 + -1.2 2,820,666 - -1.6 2,820,692 + -0.6 2,821,125 + +0.4 2,821,339 + -0.6 2,821,546 + -2.6 2,821,638 - +0.4 2,821,655 + Dsui_2669 0.20 -0.6 2,821,824 + Dsui_2669 0.43 -2.1 2,821,831 + Dsui_2669 0.44 -2.6 2,821,831 + Dsui_2669 0.44 -1.6 2,821,831 + Dsui_2669 0.44 -2.6 2,821,831 + Dsui_2669 0.44 -1.7 2,821,893 - Dsui_2669 0.52 -1.2 2,821,924 + Dsui_2669 0.56 -1.6 2,821,924 + Dsui_2669 0.56 -0.3 2,821,924 + Dsui_2669 0.56 -0.6 2,821,929 + Dsui_2669 0.57 -2.2 2,822,075 - +0.4 2,822,135 - Dsui_2669 0.84 +0.4 2,822,135 - Dsui_2669 0.84 -1.2 2,822,185 - +0.4 2,822,241 + -1.5 2,822,303 + +0.4 2,822,311 - +0.3 2,822,311 - -0.0
Or see this region's nucleotide sequence