Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2483 and Dsui_2484 are separated by 28 nucleotides Dsui_2484 and Dsui_2485 are separated by 33 nucleotides Dsui_2485 and Dsui_2486 overlap by 4 nucleotides
Dsui_2483: Dsui_2483 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,632,983 to 2,633,711
_2483
Dsui_2484: Dsui_2484 - hydroxyacylglutathione hydrolase, at 2,633,740 to 2,634,543
_2484
Dsui_2485: Dsui_2485 - response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,634,577 to 2,634,942
_2485
Dsui_2486: Dsui_2486 - diguanylate cyclase (GGDEF) domain-containing protein, at 2,634,939 to 2,635,901
_2486
Position (kb)
2634
2635 Strain fitness (log2 ratio)
-2
-1
0
1 at 2633.732 kb on - strand at 2633.755 kb on - strand at 2633.758 kb on - strand at 2633.775 kb on - strand at 2633.829 kb on - strand, within Dsui_2484 at 2634.129 kb on + strand, within Dsui_2484 at 2634.142 kb on + strand, within Dsui_2484 at 2634.379 kb on - strand, within Dsui_2484 at 2634.404 kb on + strand, within Dsui_2484 at 2634.515 kb on + strand at 2634.537 kb on + strand at 2634.611 kb on + strand at 2634.656 kb on - strand, within Dsui_2485 at 2634.659 kb on + strand, within Dsui_2485 at 2634.708 kb on + strand, within Dsui_2485 at 2634.716 kb on - strand, within Dsui_2485 at 2634.740 kb on - strand, within Dsui_2485 at 2634.779 kb on - strand, within Dsui_2485 at 2635.082 kb on + strand, within Dsui_2486 at 2635.261 kb on + strand, within Dsui_2486 at 2635.308 kb on - strand, within Dsui_2486 at 2635.313 kb on - strand, within Dsui_2486 at 2635.493 kb on + strand, within Dsui_2486 at 2635.517 kb on + strand, within Dsui_2486 at 2635.550 kb on - strand, within Dsui_2486 at 2635.602 kb on + strand, within Dsui_2486 at 2635.726 kb on - strand, within Dsui_2486 at 2635.728 kb on - strand, within Dsui_2486 at 2635.765 kb on - strand, within Dsui_2486 at 2635.785 kb on - strand, within Dsui_2486 at 2635.812 kb on - strand at 2635.869 kb on + strand at 2635.878 kb on - strand at 2635.894 kb on - strand at 2635.924 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with perchlorate 3 mM remove 2,633,732 - -0.1 2,633,755 - -0.1 2,633,758 - +0.3 2,633,775 - -0.0 2,633,829 - Dsui_2484 0.11 -0.5 2,634,129 + Dsui_2484 0.48 +0.3 2,634,142 + Dsui_2484 0.50 -0.7 2,634,379 - Dsui_2484 0.79 -1.7 2,634,404 + Dsui_2484 0.83 +0.3 2,634,515 + -0.7 2,634,537 + -2.3 2,634,611 + -0.7 2,634,656 - Dsui_2485 0.22 -0.1 2,634,659 + Dsui_2485 0.22 -0.7 2,634,708 + Dsui_2485 0.36 -2.7 2,634,716 - Dsui_2485 0.38 +0.4 2,634,740 - Dsui_2485 0.45 +0.3 2,634,779 - Dsui_2485 0.55 +0.3 2,635,082 + Dsui_2486 0.15 -0.7 2,635,261 + Dsui_2486 0.33 +0.3 2,635,308 - Dsui_2486 0.38 +0.2 2,635,313 - Dsui_2486 0.39 +0.2 2,635,493 + Dsui_2486 0.58 -2.0 2,635,517 + Dsui_2486 0.60 +0.3 2,635,550 - Dsui_2486 0.63 -0.1 2,635,602 + Dsui_2486 0.69 -2.3 2,635,726 - Dsui_2486 0.82 +0.2 2,635,728 - Dsui_2486 0.82 +0.1 2,635,765 - Dsui_2486 0.86 +0.7 2,635,785 - Dsui_2486 0.88 -0.1 2,635,812 - +0.1 2,635,869 + -0.7 2,635,878 - +1.1 2,635,894 - +0.3 2,635,924 - +0.4
Or see this region's nucleotide sequence