Strain Fitness in Dechlorosoma suillum PS around Dsui_2414
Experiment: ALP with perchlorate 3 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with perchlorate 3 mM |
---|---|---|---|---|---|
remove | |||||
2,566,908 | + | Dsui_2413 | 0.41 | +0.2 | |
2,567,153 | + | Dsui_2413 | 0.59 | +0.2 | |
2,567,200 | + | Dsui_2413 | 0.63 | -0.3 | |
2,567,355 | + | Dsui_2413 | 0.74 | +0.2 | |
2,567,419 | + | Dsui_2413 | 0.79 | -0.4 | |
2,567,420 | + | Dsui_2413 | 0.79 | +0.0 | |
2,567,716 | + | -0.1 | |||
2,567,811 | + | +0.3 | |||
2,567,957 | + | +0.3 | |||
2,567,965 | + | Dsui_2414 | 0.25 | +0.3 | |
2,567,965 | + | Dsui_2414 | 0.25 | -0.7 | |
2,567,984 | - | +0.3 | |||
2,567,984 | - | -1.2 | |||
2,568,015 | + | -0.7 | |||
2,568,159 | - | +0.3 | |||
2,568,219 | + | +0.3 | |||
2,568,229 | + | +0.3 | |||
2,568,286 | + | +0.3 | |||
2,568,418 | - | -1.2 | |||
2,568,535 | + | +0.3 | |||
2,568,540 | + | +0.3 | |||
2,568,540 | + | -0.7 | |||
2,568,540 | + | -2.0 | |||
2,568,619 | + | +0.3 | |||
2,568,651 | + | +0.3 | |||
2,568,651 | + | +0.3 | |||
2,568,652 | + | -1.2 | |||
2,568,680 | + | -1.2 | |||
2,568,726 | + | +0.3 | |||
2,568,940 | + | Dsui_2415 | 0.14 | +0.3 | |
2,568,979 | + | -0.7 | |||
2,568,994 | + | Dsui_2415 | 0.16 | -0.7 | |
2,569,036 | + | +0.3 | |||
2,569,059 | + | +0.3 | |||
2,569,059 | + | Dsui_2415 | 0.19 | -1.2 | |
2,569,059 | + | Dsui_2415 | 0.19 | +0.3 | |
2,569,271 | + | Dsui_2415 | 0.27 | +0.3 | |
2,569,339 | - | Dsui_2415 | 0.30 | -0.4 |
Or see this region's nucleotide sequence